PDB entry 3eoa
View 3eoa on RCSB PDB site
Description: Crystal structure the Fab fragment of Efalizumab in complex with LFA-1 I domain, Form I
Class: immune system/cell adhesion
Keywords: Efalizumab, Fab, antibody, LFA-1, CD11a, I domain, Alternative splicing, Calcium, Glycoprotein, Integrin, Magnesium, Membrane, Polymorphism, Receptor, Transmembrane, IMMUNE SYSTEM/CELL ADHESION COMPLEX
Deposited on
2008-09-26, released
2009-04-14
The last revision prior to the SCOPe 2.07 freeze date was dated
2009-04-14, with a file datestamp of
2009-04-10.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.227
AEROSPACI score: 0.24
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Efalizumab Fab fragment, light chain
Species: Homo sapiens [TaxId:9606]
Gene: IGG1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3eoaa1, d3eoaa2 - Chain 'B':
Compound: Efalizumab Fab fragment, heavy chain
Species: Homo sapiens [TaxId:9606]
Gene: IGG1
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: Efalizumab Fab fragment, heavy chain
Species: Homo sapiens [TaxId:9606]
Gene: IGG1
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: Integrin alpha-L
Species: Homo sapiens [TaxId:9606]
Gene: ITGAL, CD11A
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3eoai_ - Chain 'J':
Compound: Integrin alpha-L
Species: Homo sapiens [TaxId:9606]
Gene: ITGAL, CD11A
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3eoaj_ - Chain 'L':
Compound: Efalizumab Fab fragment, light chain
Species: Homo sapiens [TaxId:9606]
Gene: IGG1
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.07: d3eoal1, d3eoal2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3eoaA (A:)
diqmtqspsslsasvgdrvtitcrasktiskylawyqqkpgkapklliysgstlqsgvps
rfsgsgsgtdftltisslqpedfatyycqqhneypltfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec
- Chain 'B':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'I':
Sequence, based on SEQRES records: (download)
>3eoaI (I:)
gnvdlvflfdgsmslqpdefqkildfmkdvmkklsntsyqfaavqfstsyktefdfsdyv
krkdpdallkhvkhmllltntfgainyvatevfreelgarpdatkvliiitdgeatdsgn
idaakdiiryiigigkhfqtkesqetlhkfaskpasefvkildtfeklkdlftelqkkiy
v
Sequence, based on observed residues (ATOM records): (download)
>3eoaI (I:)
gnvdlvflfdgsmslqpdefqkildfmkdvmkklsntsyqfaavqfstsyktefdfsdyv
krkdpdallkhvkhmllltntfgainyvatevfreelgarpdatkvliiitdgeatdsgn
idaakdiiryiigigkhfqtkesqetlhkfaskpasefvkildtfeklkdlftelqkki
- Chain 'J':
Sequence, based on SEQRES records: (download)
>3eoaJ (J:)
gnvdlvflfdgsmslqpdefqkildfmkdvmkklsntsyqfaavqfstsyktefdfsdyv
krkdpdallkhvkhmllltntfgainyvatevfreelgarpdatkvliiitdgeatdsgn
idaakdiiryiigigkhfqtkesqetlhkfaskpasefvkildtfeklkdlftelqkkiy
v
Sequence, based on observed residues (ATOM records): (download)
>3eoaJ (J:)
gnvdlvflfdgsmslqpdefqkildfmkdvmkklsntsyqfaavqfstsyktefdfsdyv
krkdpdallkhvkhmllltntfgainyvatevfreelgarpdatkvliiitdgeatdsgn
idaakdiiryiigigkhfqtkesqetlhkfaskpasefvkildtfeklkdlftelqkki
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>3eoaL (L:)
diqmtqspsslsasvgdrvtitcrasktiskylawyqqkpgkapklliysgstlqsgvps
rfsgsgsgtdftltisslqpedfatyycqqhneypltfgqgtkveikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec