PDB entry 3eo1
View 3eo1 on RCSB PDB site
Description: Structure of the Fab Fragment of GC-1008 in Complex with Transforming Growth Factor-Beta 3
Class: immune system/cytokine
Keywords: Antibody-cytokine complex, Growth factor, FAB fragment, Cardiomyopathy, Cleavage on pair of basic residues, Glycoprotein, Mitogen, Polymorphism, Secreted, IMMUNE SYSTEM/CYTOKINE COMPLEX
Deposited on
2008-09-26, released
2008-12-02
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-01-06, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 3.1 Å
R-factor: 0.255
AEROSPACI score: 0.13
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: GC-1008 Fab Light Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3eo1a1, d3eo1a2 - Chain 'B':
Compound: GC-1008 Fab Heavy Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Transforming growth factor beta-3
Species: Homo sapiens [TaxId:9606]
Gene: TGFB3
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3eo1c_ - Chain 'D':
Compound: GC-1008 Fab Light Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3eo1d1, d3eo1d2 - Chain 'E':
Compound: GC-1008 Fab Heavy Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'F':
Compound: Transforming growth factor beta-3
Species: Homo sapiens [TaxId:9606]
Gene: TGFB3
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3eo1f_ - Chain 'G':
Compound: GC-1008 Fab Light Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3eo1g1, d3eo1g2 - Chain 'H':
Compound: GC-1008 Fab Heavy Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'I':
Compound: Transforming growth factor beta-3
Species: Homo sapiens [TaxId:9606]
Gene: TGFB3
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3eo1i_ - Chain 'J':
Compound: GC-1008 Fab Light Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3eo1j1, d3eo1j2 - Chain 'K':
Compound: GC-1008 Fab Heavy Chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: Transforming growth factor beta-3
Species: Homo sapiens [TaxId:9606]
Gene: TGFB3
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d3eo1l_
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3eo1A (A:)
etvltqspgtlslspgeratlscrasqslgssylawyqqkpgqaprlliygassrapgip
drfsgsgsgtdftltisrlepedfavyycqqyadspitfgqgtrleikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>3eo1C (C:)
aldtnycfrnleenccvrplyidfrqdlgwkwvhepkgyyanfcsgpcpylrsadtthst
vlglyntlnpeasaspccvpqdlepltilyyvgrtpkveqlsnmvvksckcs
- Chain 'D':
Sequence; same for both SEQRES and ATOM records: (download)
>3eo1D (D:)
etvltqspgtlslspgeratlscrasqslgssylawyqqkpgqaprlliygassrapgip
drfsgsgsgtdftltisrlepedfavyycqqyadspitfgqgtrleikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec
- Chain 'E':
No sequence available.
- Chain 'F':
Sequence; same for both SEQRES and ATOM records: (download)
>3eo1F (F:)
aldtnycfrnleenccvrplyidfrqdlgwkwvhepkgyyanfcsgpcpylrsadtthst
vlglyntlnpeasaspccvpqdlepltilyyvgrtpkveqlsnmvvksckcs
- Chain 'G':
Sequence; same for both SEQRES and ATOM records: (download)
>3eo1G (G:)
etvltqspgtlslspgeratlscrasqslgssylawyqqkpgqaprlliygassrapgip
drfsgsgsgtdftltisrlepedfavyycqqyadspitfgqgtrleikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec
- Chain 'H':
No sequence available.
- Chain 'I':
Sequence; same for both SEQRES and ATOM records: (download)
>3eo1I (I:)
aldtnycfrnleenccvrplyidfrqdlgwkwvhepkgyyanfcsgpcpylrsadtthst
vlglyntlnpeasaspccvpqdlepltilyyvgrtpkveqlsnmvvksckcs
- Chain 'J':
Sequence; same for both SEQRES and ATOM records: (download)
>3eo1J (J:)
etvltqspgtlslspgeratlscrasqslgssylawyqqkpgqaprlliygassrapgip
drfsgsgsgtdftltisrlepedfavyycqqyadspitfgqgtrleikrtvaapsvfifp
psdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstl
tlskadyekhkvyacevthqglsspvtksfnrgec
- Chain 'K':
No sequence available.
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>3eo1L (L:)
aldtnycfrnleenccvrplyidfrqdlgwkwvhepkgyyanfcsgpcpylrsadtthst
vlglyntlnpeasaspccvpqdlepltilyyvgrtpkveqlsnmvvksckcs