PDB entry 3e6m
View 3e6m on RCSB PDB site
Description: The crystal structure of a MarR family transcriptional regulator from Silicibacter pomeroyi DSS.
Class: transcription regulator
Keywords: APC88769, MarR, Silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, DNA-binding, Plasmid, Transcription, Transcription regulation, transcription regulator
Deposited on
2008-08-15, released
2008-09-02
The last revision prior to the SCOPe 2.04 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.187
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: MarR family Transcriptional regulator
Species: Silicibacter pomeroyi [TaxId:89184]
Gene: SPOA0451
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3e6ma_ - Chain 'B':
Compound: MarR family Transcriptional regulator
Species: Silicibacter pomeroyi [TaxId:89184]
Gene: SPOA0451
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3e6mb_ - Chain 'C':
Compound: MarR family Transcriptional regulator
Species: Silicibacter pomeroyi [TaxId:89184]
Gene: SPOA0451
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3e6mc_ - Chain 'D':
Compound: MarR family Transcriptional regulator
Species: Silicibacter pomeroyi [TaxId:89184]
Gene: SPOA0451
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3e6md_ - Chain 'E':
Compound: MarR family Transcriptional regulator
Species: Silicibacter pomeroyi [TaxId:89184]
Gene: SPOA0451
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3e6me_ - Chain 'F':
Compound: MarR family Transcriptional regulator
Species: Silicibacter pomeroyi [TaxId:89184]
Gene: SPOA0451
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3e6mf_ - Chain 'G':
Compound: MarR family Transcriptional regulator
Species: Silicibacter pomeroyi [TaxId:89184]
Gene: SPOA0451
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3e6mg_ - Chain 'H':
Compound: MarR family Transcriptional regulator
Species: Silicibacter pomeroyi [TaxId:89184]
Gene: SPOA0451
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3e6mh_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3e6mA (A:)
snamtearkipkpsfpygspgelnsflpylltrithiwsselnqalaseklptpklrlls
slsaygeltvgqlatlgvmeqsttsrtvdqlvdeglaarsisdadqrkrtvvltrkgkkk
laeisplindfhaelvgnvdpdklqtcievlgeilkgktdy
Sequence, based on observed residues (ATOM records): (download)
>3e6mA (A:)
pkpsfpygspgelnsflpylltrithiwsselnqalaseklptpklrllsslsaygeltv
gqlatlgvmeqsttsrtvdqlvdeglaarsidqrkrtvvltrkgkkklaeisplindfha
elvgnvdpdklqtcievlgeilkgkt
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3e6mB (B:)
snamtearkipkpsfpygspgelnsflpylltrithiwsselnqalaseklptpklrlls
slsaygeltvgqlatlgvmeqsttsrtvdqlvdeglaarsisdadqrkrtvvltrkgkkk
laeisplindfhaelvgnvdpdklqtcievlgeilkgktdy
Sequence, based on observed residues (ATOM records): (download)
>3e6mB (B:)
psfpygspgelnsflpylltrithiwsselnqalaseklptpklrllsslsaygeltvgq
latlgvmeqsttsrtvdqlvdeglaarsisdqrkrtvvltrkgkkklaeisplindfhae
lvgnvdpdklqtcievlgeilkgktdy
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3e6mC (C:)
snamtearkipkpsfpygspgelnsflpylltrithiwsselnqalaseklptpklrlls
slsaygeltvgqlatlgvmeqsttsrtvdqlvdeglaarsisdadqrkrtvvltrkgkkk
laeisplindfhaelvgnvdpdklqtcievlgeilkgktdy
Sequence, based on observed residues (ATOM records): (download)
>3e6mC (C:)
pkpsfpygspgelnsflpylltrithiwsselnqalaseklptpklrllsslsaygeltv
gqlatlgvmeqsttsrtvdqlvdeglaarsisdrkrtvvltrkgkkklaeisplindfha
elvgnvdpdklqtcievlgeilkgkt
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3e6mD (D:)
snamtearkipkpsfpygspgelnsflpylltrithiwsselnqalaseklptpklrlls
slsaygeltvgqlatlgvmeqsttsrtvdqlvdeglaarsisdadqrkrtvvltrkgkkk
laeisplindfhaelvgnvdpdklqtcievlgeilkgktdy
Sequence, based on observed residues (ATOM records): (download)
>3e6mD (D:)
psfpygspgelnsflpylltrithiwsselnqalaseklptpklrllsslsaygeltvgq
latlgvmeqsttsrtvdqlvdeglaarsisdadqrkrtvvltrkgkkklaeisplindfh
aelvgnvdpdklqtcievlgeilkgktdy
- Chain 'E':
Sequence, based on SEQRES records: (download)
>3e6mE (E:)
snamtearkipkpsfpygspgelnsflpylltrithiwsselnqalaseklptpklrlls
slsaygeltvgqlatlgvmeqsttsrtvdqlvdeglaarsisdadqrkrtvvltrkgkkk
laeisplindfhaelvgnvdpdklqtcievlgeilkgktdy
Sequence, based on observed residues (ATOM records): (download)
>3e6mE (E:)
pkpsfpygspgelnsflpylltrithiwsselnqalaseklptpklrllsslsaygeltv
gqlatlgvmeqsttsrtvdqlvdeglaarsisrkrtvvltrkgkkklaeisplindfhae
lvgnvdpdklqtcievlgeilkgktdy
- Chain 'F':
Sequence, based on SEQRES records: (download)
>3e6mF (F:)
snamtearkipkpsfpygspgelnsflpylltrithiwsselnqalaseklptpklrlls
slsaygeltvgqlatlgvmeqsttsrtvdqlvdeglaarsisdadqrkrtvvltrkgkkk
laeisplindfhaelvgnvdpdklqtcievlgeilkgktdy
Sequence, based on observed residues (ATOM records): (download)
>3e6mF (F:)
psfpygspgelnsflpylltrithiwsselnqalaseklptpklrllsslsaygeltvgq
latlgvmeqsttsrtvdqlvdeglaarsisqrkrtvvltrkgkkklaeisplindfhael
vgnvdpdklqtcievlgeilkgktdy
- Chain 'G':
Sequence, based on SEQRES records: (download)
>3e6mG (G:)
snamtearkipkpsfpygspgelnsflpylltrithiwsselnqalaseklptpklrlls
slsaygeltvgqlatlgvmeqsttsrtvdqlvdeglaarsisdadqrkrtvvltrkgkkk
laeisplindfhaelvgnvdpdklqtcievlgeilkgktdy
Sequence, based on observed residues (ATOM records): (download)
>3e6mG (G:)
pkpsfpygspgelnsflpylltrithiwsselnqalaseklptpklrllsslsaygeltv
gqlatlgvmeqsttsrtvdqlvdeglaarsisqrkrtvvltrkgkkklaeisplindfha
elvgnvdpdklqtcievlgeilkgktdy
- Chain 'H':
Sequence, based on SEQRES records: (download)
>3e6mH (H:)
snamtearkipkpsfpygspgelnsflpylltrithiwsselnqalaseklptpklrlls
slsaygeltvgqlatlgvmeqsttsrtvdqlvdeglaarsisdadqrkrtvvltrkgkkk
laeisplindfhaelvgnvdpdklqtcievlgeilkgktdy
Sequence, based on observed residues (ATOM records): (download)
>3e6mH (H:)
psfpygspgelnsflpylltrithiwsselnqalaseklptpklrllsslsaygeltvgq
latlgvmeqsttsrtvdqlvdeglaarsisdqrkrtvvltrkgkkklaeisplindfhae
lvgnvdpdklqtcievlgeilkgktdy