PDB entry 3e4u

View 3e4u on RCSB PDB site
Description: Crystal Structure of the Wild-Type Human BCL6 BTB/POZ Domain
Class: transcription
Keywords: BTB/POZ Protein Interaction Domain, Activator, DNA-binding, Metal-binding, Nucleus, Phosphoprotein, Proto-oncogene, Repressor, Transcription, Transcription regulation, Zinc-finger
Deposited on 2008-08-12, released 2008-12-09
The last revision prior to the SCOPe 2.02 freeze date was dated 2012-03-28, with a file datestamp of 2012-03-23.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.221
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: B-cell lymphoma 6 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: BCL6, BCL5, LAZ3, ZBTB27, ZNF51
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3e4ua_
  • Chain 'B':
    Compound: B-cell lymphoma 6 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: BCL6, BCL5, LAZ3, ZBTB27, ZNF51
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3e4ub_
  • Chain 'C':
    Compound: B-cell lymphoma 6 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: BCL6, BCL5, LAZ3, ZBTB27, ZNF51
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3e4uc_
  • Chain 'D':
    Compound: B-cell lymphoma 6 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: BCL6, BCL5, LAZ3, ZBTB27, ZNF51
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3e4ud_
  • Chain 'E':
    Compound: B-cell lymphoma 6 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: BCL6, BCL5, LAZ3, ZBTB27, ZNF51
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3e4ue_
  • Chain 'F':
    Compound: B-cell lymphoma 6 protein
    Species: Homo sapiens [TaxId:9606]
    Gene: BCL6, BCL5, LAZ3, ZBTB27, ZNF51
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.02: d3e4uf_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3e4uA (A:)
gplgsadsciqftrhasdvllnlnrlrsrdiltdvvivvsreqfrahktvlmacsglfys
iftdqlkcnlsvinldpeinpegfcilldfmytsrlnlregnimavmatamylqmehvvd
tcrkfikase

    Sequence, based on observed residues (ATOM records): (download) 
    >3e4uA (A:)
sciqftrhasdvllnlnrlrsrdiltdvvivveqfrahktvlmacsglfysiftdqlkcn
lsvinldeinpegfcilldfmytsrlnlregnimavmatamylqmehvvdtcrkfikas

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3e4uB (B:)
gplgsadsciqftrhasdvllnlnrlrsrdiltdvvivvsreqfrahktvlmacsglfys
iftdqlkcnlsvinldpeinpegfcilldfmytsrlnlregnimavmatamylqmehvvd
tcrkfikase

    Sequence, based on observed residues (ATOM records): (download) 
    >3e4uB (B:)
sciqftrhasdvllnlnrlrsrdiltdvvivvseqfrahktvlmacsglfysiftdqlkc
nlsvinleinpegfcilldfmytsrlnlregnimavmatamylqmehvvdtcrkfikase

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >3e4uC (C:)
gplgsadsciqftrhasdvllnlnrlrsrdiltdvvivvsreqfrahktvlmacsglfys
iftdqlkcnlsvinldpeinpegfcilldfmytsrlnlregnimavmatamylqmehvvd
tcrkfikase

    Sequence, based on observed residues (ATOM records): (download) 
    >3e4uC (C:)
sciqftrhasdvllnlnrlrsrdiltdvvivveqfrahktvlmacsglfysiftdqlkcn
lsvinldeinpegfcilldfmytsrlnlregnimavmatamylqmehvvdtcrkfikas

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >3e4uD (D:)
gplgsadsciqftrhasdvllnlnrlrsrdiltdvvivvsreqfrahktvlmacsglfys
iftdqlkcnlsvinldpeinpegfcilldfmytsrlnlregnimavmatamylqmehvvd
tcrkfikase

    Sequence, based on observed residues (ATOM records): (download) 
    >3e4uD (D:)
sciqftrhasdvllnlnrlrsrdiltdvvivvseqfrahktvlmacsglfysiftdqlkc
nlsvinleinpegfcilldfmytsrlnlregnimavmatamylqmehvvdtcrkfika

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >3e4uE (E:)
gplgsadsciqftrhasdvllnlnrlrsrdiltdvvivvsreqfrahktvlmacsglfys
iftdqlkcnlsvinldpeinpegfcilldfmytsrlnlregnimavmatamylqmehvvd
tcrkfikase

    Sequence, based on observed residues (ATOM records): (download) 
    >3e4uE (E:)
sciqftrhasdvllnlnrlrsrdiltdvvivveqfrahktvlmacsglfysiftnlsvin
ldpinegfcilldfmytsrlnlregnimavmatamylqmehvvdtcrkfika

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >3e4uF (F:)
gplgsadsciqftrhasdvllnlnrlrsrdiltdvvivvsreqfrahktvlmacsglfys
iftdqlkcnlsvinldpeinpegfcilldfmytsrlnlregnimavmatamylqmehvvd
tcrkfikase

    Sequence, based on observed residues (ATOM records): (download) 
    >3e4uF (F:)
sciqftrhasdvllnlnrlrsrdiltdvvivvreqfrahktvlmacsglfysiftdnlsv
inlegfcilldfmytsrlnlregnimavmatamylqmehvvdtcrkfika