PDB entry 3dzz

View 3dzz on RCSB PDB site
Description: crystal structure of a putative plp-dependent aminotransferase (lbul_1103) from lactobacillus delbrueckii subsp. at 1.61 a resolution
Class: transferase
Keywords: putative plp-dependent aminotransferase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, transferase
Deposited on 2008-07-30, released 2008-08-12
The last revision prior to the SCOPe 2.05 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.61 Å
R-factor: 0.146
AEROSPACI score: 0.62 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: putative pyridoxal 5'-phosphate-dependent C-S lyase
    Species: Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 [TaxId:321956]
    Gene: YP_813084.1, LBUL_1103
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3dzza_
  • Chain 'B':
    Compound: putative pyridoxal 5'-phosphate-dependent C-S lyase
    Species: Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 [TaxId:321956]
    Gene: YP_813084.1, LBUL_1103
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.05: d3dzzb_
  • Heterogens: CA, CL, ACT, PG4, PEG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3dzzA (A:)
gmaekqydfthvpkrqgnsikwgvlkekelpmwiaemdfkiapeimasmeeklkvaafgy
esvpaeyykavadweeiehrarpkedwcvfasgvvpaisamvrqftspgdqilvqepvyn
mfysviegngrrvissdliyenskysvnwadleeklatpsvrmmvfcnphnpigyawsee
evkriaelcakhqvllisdeihgdlvltdeditpaftvdwdaknwvvslispsktfnlaa
lhaacaiipnpdlraraeesfflagigepnllaipaaiaayeeghdwlrelkqvlrdnfa
yareflakevpevkvldsnasylawvdisalgmnaedfckylrektgliisagngyrgng
hefvrinlacpkelvidgmqrlkqgvlnlnn

    Sequence, based on observed residues (ATOM records): (download) 
    >3dzzA (A:)
kqydfthvpkrqgnsikwgvlkekelpmwiaemdfkiapeimasmeeklkvaafgyesvp
aeyykavadweeiehrarpkedwcvfasgvvpaisamvrqftspgdqilvqepvynmfys
viegngrrvissdliyenskysvnwadleeklatpsvrmmvfcnphnpigyawseeevkr
iaelcakhqvllisdeihgdlvltdeditpaftvdwdaknwvvslispsktfnlaalhaa
caiipnpdlraraeesfflagigepnllaipaaiaayeeghdwlrelkqvlrdnfayare
flakevpevkvldsnasylawvdisalgmnaedfckylrektgliisagngyrgnghefv
rinlacpkelvidgmqrlkqgvlnln

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3dzzB (B:)
gmaekqydfthvpkrqgnsikwgvlkekelpmwiaemdfkiapeimasmeeklkvaafgy
esvpaeyykavadweeiehrarpkedwcvfasgvvpaisamvrqftspgdqilvqepvyn
mfysviegngrrvissdliyenskysvnwadleeklatpsvrmmvfcnphnpigyawsee
evkriaelcakhqvllisdeihgdlvltdeditpaftvdwdaknwvvslispsktfnlaa
lhaacaiipnpdlraraeesfflagigepnllaipaaiaayeeghdwlrelkqvlrdnfa
yareflakevpevkvldsnasylawvdisalgmnaedfckylrektgliisagngyrgng
hefvrinlacpkelvidgmqrlkqgvlnlnn

    Sequence, based on observed residues (ATOM records): (download) 
    >3dzzB (B:)
kqydfthvpkrqgnsikwgvlkekelpmwiaemdfkiapeimasmeeklkvaafgyesvp
aeyykavadweeiehrarpkedwcvfasgvvpaisamvrqftspgdqilvqepvynmfys
viegngrrvissdliyenskysvnwadleeklatpsvrmmvfcnphnpigyawseeevkr
iaelcakhqvllisdeihgdlvltdeditpaftvdwdaknwvvslispsktfnlaalhaa
caiipnpdlraraeesfflagigepnllaipaaiaayeeghdwlrelkqvlrdnfayare
flakevpevkvldsnasylawvdisalgmnaedfckylrektgliisagngyrgnghefv
rinlacpkelvidgmqrlkqgvlnl