PDB entry 3dy6
View 3dy6 on RCSB PDB site
Description: PPARdelta complexed with an anthranilic acid partial agonist
Class: transcription
Keywords: PPAR, nulear receptor, Activator, DNA-binding, Metal-binding, Nucleus, Transcription, Transcription regulation, Zinc-finger
Deposited on
2008-07-25, released
2008-10-07
The last revision prior to the SCOPe 2.05 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: 0.219
AEROSPACI score: 0.25
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Peroxisome proliferator-activated receptor delta
Species: HOMO SAPIENS
Gene: PPARD, NR1C2, PPARB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3dy6a_ - Chain 'B':
Compound: Peroxisome proliferator-activated receptor delta
Species: HOMO SAPIENS
Gene: PPARD, NR1C2, PPARB
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d3dy6b_ - Heterogens: IOD, DY6, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3dy6A (A:)
qvadlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwkq
lvnglppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheai
famlasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlal
fiaaiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlv
tehaqmmqrikktetetslhpllqeiykdmy
Sequence, based on observed residues (ATOM records): (download)
>3dy6A (A:)
vadlkafskhiynaylknfnmtkkkarsiltapfvihdietlwqaekglvwglppykeis
vhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifamlasivnkdg
llvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfiaaiilcgdrp
glmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvtehaqmmqrikk
tetetslhpllqeiykd
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3dy6B (B:)
qvadlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwkq
lvnglppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheai
famlasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlal
fiaaiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlv
tehaqmmqrikktetetslhpllqeiykdmy
Sequence, based on observed residues (ATOM records): (download)
>3dy6B (B:)
dlkafskhiynaylknfnmtkkkarsiltapfvihdietlwqaekglvwglppykeisvh
vfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifamlasivnkdgll
vangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfiaaiilcgdrpgl
mnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvtehaqmmqrikkte
tetslhpllqeiykd