PDB entry 3dx6

View 3dx6 on RCSB PDB site
Description: Crystal Structure of B*4402 presenting a 10mer EBV epitope
Class: immune system
Keywords: MHC, Glycoprotein, Glycation, Host-virus interaction, Immune response, Membrane, MHC I, Transmembrane, Pyrrolidone carboxylic acid, Disease mutation, IMMUNE SYSTEM
Deposited on 2008-07-23, released 2009-01-27
The last revision prior to the SCOPe 2.04 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-25.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.21
AEROSPACI score: 0.53 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: HLA class I histocompatibility complex HLA-B*4402
  Species: Homo sapiens [TaxId:9606]
  Gene: HLA-B, HLAB
  Database cross-references and differences (RAF-indexed):
  • Uniprot P30481 (0-275)
• Chain 'B':
  Compound: Beta-2-microglobulin
  Species: Homo sapiens [TaxId:9606]
  Gene: B2M, CDABP0092, HDCMA22P
  Database cross-references and differences (RAF-indexed):
  • Uniprot P61769 (0-98)
  Domains in SCOPe 2.04: d3dx6b_
• Chain 'C':
  Compound: EBV decapeptide epitope
  Species: synthetic, synthetic
  Database cross-references and differences (RAF-indexed):
  • Uniprot P03204 (0-9)
• Heterogens: ACT, GOL, HOH

PDB Chain Sequences:

• Chain 'A':
  No sequence available.
  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >3dx6B (B:)
  iqrtpkiqvysrhpaengksnflncyvsgfhpsdievdllkngeriekvehsdlsfskdw
  sfyllyyteftptekdeyacrvnhvtlsqpkivkwdrdm
  

  
  
• Chain 'C':
  No sequence available.