PDB entry 3dvi

View 3dvi on RCSB PDB site
Description: Crystal structure of kappa 1 amyloidogenic light chain variable domain
Class: protein fibril
Keywords: AL, light chain amyloidosis, amyloid, immunoglobulin, light chain, light chain variable domain, Protein fibril
Deposited on 2008-07-18, released 2009-05-12
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-05-26, with a file datestamp of 2009-05-22.
Experiment type: XRAY
Resolution: 1.53 Å
R-factor: 0.191
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Amyloidogenic light chain variable domain AL-103
    Species: Homo sapiens [TaxId:9606]
    Gene: mutant of Vk1 O18/O8 germline
    Database cross-references and differences (RAF-indexed):
    • PDB 3DVI (0-108)
    Domains in SCOPe 2.04: d3dvia_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3dviA (A:)
    tdiqmtqspsslsasvgdrvtitcqasqdisnyliwyqqkpgkapklliydasnletgvp
    srfsgsgsgtdftftisslqpediatyycqqyhnlppytfgpgtkleik