PDB entry 3dgg
View 3dgg on RCSB PDB site
Description: Crystal structure of FabOX108
Class: immune system
Keywords: Antibody fragments, Fabs, Transient expression, Structural Genomics, Oxford Protein Production Facility, OPPF, Immunoglobulin domain, IMMUNE SYSTEM
Deposited on
2008-06-13, released
2008-08-12
The last revision prior to the SCOPe 2.01 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.19
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: FabOX108 Light Chain Fragment
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3dgga1, d3dgga2 - Chain 'B':
Compound: FabOX108 Heavy Chain Fragment
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3dggb1 - Chain 'C':
Compound: FabOX108 Light Chain Fragment
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3dggc1, d3dggc2 - Chain 'D':
Compound: FabOX108 Heavy Chain Fragment
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3dggd1 - Heterogens: MG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>3dggA (A:)
divltqspaslavslgqratiscrasksvstsgysymhwyqqkpgqppklliylasnles
gvparfsgsgsgtdftlnihpveeedaatyycqhsrelltfgagtklelkradaaptvsi
fppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmss
tltltkdeyerhnsytceathktstspivksfnrnec
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3dggB (B:)
evklqqsgpelvkpgasvkmsckasgytftsyvmhwvkqkpgqglewigyinpynddtny
nekfkgkatltsdkssstaymelssltsedsavyycaredyygsrwgywgqgttltvssa
kttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdl
ytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdcgkhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3dggB (B:)
evklqqsgpelvkpgasvkmsckasgytftsyvmhwvkqkpgqglewigyinpynddtny
nekfkgkatltsdkssstaymelssltsedsavyycaredyygsrwgywgqgttltvssa
kttppsvyplapsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssv
tvpsstwpsetvtcnvahpasstkvdkkivpr
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3dggC (C:)
divltqspaslavslgqratiscrasksvstsgysymhwyqqkpgqppklliylasnles
gvparfsgsgsgtdftlnihpveeedaatyycqhsrelltfgagtklelkradaaptvsi
fppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmss
tltltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>3dggC (C:)
divltqspaslavslgqratiscrasksvstsgysymhwyqqkpgqppklliylasnles
gvparfsgsgsgtdftlnihpveeedaatyycqhsrelltfgagtklelkradaaptvsi
fppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmss
tltltkdeyerhnsytceathktstspivksfnrn
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3dggD (D:)
evklqqsgpelvkpgasvkmsckasgytftsyvmhwvkqkpgqglewigyinpynddtny
nekfkgkatltsdkssstaymelssltsedsavyycaredyygsrwgywgqgttltvssa
kttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdl
ytlsssvtvpsstwpsetvtcnvahpasstkvdkkivprdcgkhhhhhh
Sequence, based on observed residues (ATOM records): (download)
>3dggD (D:)
evklqqsgpelvkpgasvkmsckasgytftsyvmhwvkqkpgqglewigyinpynddtny
nekfkgkatltsdkssstaymelssltsedsavyycaredyygsrwgywgqgttltvssa
kttppsvyplapgssmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlss
svtvpsstwpsetvtcnvahpasstkvdkkivprd