PDB entry 3d85
View 3d85 on RCSB PDB site
Description: Crystal structure of IL-23 in complex with neutralizing FAB
Class: immune system/cytokine
Keywords: Interleukin-23, FAB, IMMUNE SYSTEM/CYTOKINE COMPLEX
Deposited on
2008-05-22, released
2008-09-02
The last revision prior to the SCOPe 2.04 freeze date was dated
2008-12-23, with a file datestamp of
2009-02-20.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.172
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: FAB of antibody 7G10, light chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3d85a1, d3d85a2 - Chain 'B':
Compound: FAB of antibody 7G10, heavy chain
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Interleukin-23 subunit p19
Species: Homo sapiens [TaxId:9606]
Gene: IL23A, SGRF, UNQ2498/PRO5798
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: Interleukin-12 subunit p40
Species: Homo sapiens [TaxId:9606]
Gene: IL12B, NKSF2
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.04: d3d85d1, d3d85d2, d3d85d3 - Heterogens: IMD, MPD, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3d85A (A:)
divmtqspatlsvtpgdrvslscrasqsisdylhwyrqkshesprllikyasqsisgips
rfsgsgsgsdftlsinsvepedvgvyycqnghsfpftfgsgtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrgec
Sequence, based on observed residues (ATOM records): (download)
>3d85A (A:)
divmtqspatlsvtpgdrvslscrasqsisdylhwyrqkshesprllikyasqsisgips
rfsgsgsgsdftlsinsvepedvgvyycqnghsfpftfgsgtkleikrtvaapsvfifpp
sdeqlksgtasvvcllnnfypreakvqwkvdnalqsgnsqesvteqdskdstyslsstlt
lskadyekhkvyacevthqglsspvtksfnrge
- Chain 'B':
No sequence available.
- Chain 'C':
No sequence available.
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3d85D (D:)
iwelkkdvyvveldwypdapgemvvltcdtpeedgitwtldqssevlgsgktltiqvkef
gdagqytchkggevlshsllllhkkedgiwstdilkdqkepknktflrceaknysgrftc
wwlttistdltfsvkssrgssdpqgvtcgaatlsaervrgdnkeyeysvecqedsacpaa
eeslpievmvdavhklkyeqytssffirdiikpdppknlqlkplknsrqvevsweypdtw
stphsyfsltfcvqvqgkskrekkdrvftdktsatvicrknasisvraqdryyssswsew
asvpcs
Sequence, based on observed residues (ATOM records): (download)
>3d85D (D:)
iwelkkdvyvveldwypdapgemvvltcdtpeedgitwtldqssevlgsgktltiqvkef
gdagqytchkggevlshsllllhkkedgiwstdilkdqknktflrceaknysgrftcwwl
ttistdltfsvkssrgssdpqgvtcgaatlsaervrnkeyeysvecqedsacpaaeeslp
ievmvdavhklkyeqytssffirdiikpdppknlqlkplqvevsweypdtwstphsyfsl
tfcvqvqgkdrvftdktsatvicrknasisvraqdryyssswsewasvpc