PDB entry 3d18
View 3d18 on RCSB PDB site
Description: Crystal structure of HLA-B*2709 complexed with a variant of the latent membrane protein 2 peptide (LMP2(L)) of epstein-barr virus
Class: immune system
Keywords: IMMUNE SYSTEM-COMPLEX, Glycoprotein, Host-virus interaction, Immune response, Membrane, MHC I, Transmembrane, Disease mutation, Glycation, Immunoglobulin domain, Pyrrolidone carboxylic acid, Secreted, Phosphoprotein, IMMUNE SYSTEM
Deposited on
2008-05-05, released
2009-05-05
The last revision prior to the SCOPe 2.01 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-25.
Experiment type: XRAY
Resolution: 1.74 Å
R-factor: 0.194
AEROSPACI score: 0.53
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: HLA class I histocompatibility antigen, B-27 alpha chain
Species: Homo sapiens [TaxId:9606]
Gene: HLA-B, HLAB
Database cross-references and differences (RAF-indexed):
- Chain 'B':
Compound: Beta-2-microglobulin
Species: Homo sapiens [TaxId:9606]
Gene: B2M
Database cross-references and differences (RAF-indexed):
- Uniprot P61769 (1-99)
- initiating methionine (0)
Domains in SCOPe 2.01: d3d18b_ - Chain 'C':
Compound: Latent membrane protein 2
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: GOL, TRS, MES, HOH