PDB entry 3cwd

View 3cwd on RCSB PDB site
Description: Molecular recognition of nitro-fatty acids by PPAR gamma
Class: transcription
Keywords: ppar gamma, nuclear receptor, SRC1-2 motif, Activator, Alternative splicing, Diabetes mellitus, Disease mutation, DNA-binding, Metal-binding, Nucleus, Obesity, Phosphoprotein, Polymorphism, Transcription, Transcription regulation, Zinc, Zinc-finger
Deposited on 2008-04-21, released 2008-07-08
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.4 Å
R-factor: 0.236
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Peroxisome proliferator-activated receptor gamma
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3cwda_
  • Chain 'B':
    Compound: Peroxisome proliferator-activated receptor gamma
    Species: HOMO SAPIENS
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3cwdb_
  • Chain 'C':
    Compound: src1-2 peptide
    Database cross-references and differences (RAF-indexed):
  • Chain 'D':
    Compound: src1-2 peptide
    Database cross-references and differences (RAF-indexed):
  • Heterogens: LNA, LNB, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3cwdA (A:)
    sadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkikfkhi
    tplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiy
    tmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaif
    iaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivt
    ehvqllqvikktetdmslhpllqeiykdly
    

    Sequence, based on observed residues (ATOM records): (download)
    >3cwdA (A:)
    sadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedskevair
    ifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnkdgvl
    isegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgdrpgl
    lnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvikkte
    tdmslhpllqeiykdly
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3cwdB (B:)
    sadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkikfkhi
    tplqeqskevairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiy
    tmlaslmnkdgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaif
    iaviilsgdrpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivt
    ehvqllqvikktetdmslhpllqeiykdly
    

    Sequence, based on observed residues (ATOM records): (download)
    >3cwdB (B:)
    sadlralakhlydsyiksfpltkakarailtgkttdkspfviydmnslmmgedkikqske
    vairifqgcqfrsveavqeiteyaksipgfvnldlndqvtllkygvheiiytmlaslmnk
    dgvlisegqgfmtreflkslrkpfgdfmepkfefavkfnalelddsdlaifiaviilsgd
    rpgllnvkpiediqdnllqalelqlklnhpessqlfakllqkmtdlrqivtehvqllqvi
    kktetdmslhpllqeiykdl
    

  • Chain 'C':
    No sequence available.

  • Chain 'D':
    No sequence available.