PDB entry 3cmm

View 3cmm on RCSB PDB site
Description: Crystal Structure of the Uba1-Ubiquitin Complex
Class: ligase/protein binding
Keywords: Ubiquitin, E1, Uba1, Protein turnover, ligase, Conformational change, thioester, adenylation, transthioesterification, ATP-binding, Nucleotide-binding, Nucleus, Phosphoprotein, Ubl conjugation pathway, DNA damage, DNA repair, LIGASE-PROTEIN BINDING COMPLEX
Deposited on 2008-03-23, released 2008-08-05
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.194
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Ubiquitin-activating enzyme E1 1
  Species: SACCHAROMYCES CEREVISIAE
  Gene: UBA1
  Database cross-references and differences (RAF-indexed):
  • Uniprot P22515 (Start-1014)
• Chain 'B':
  Compound: Ubiquitin
  Species: SACCHAROMYCES CEREVISIAE
  Gene: UBI1, RPL40A
  Database cross-references and differences (RAF-indexed):
  • Uniprot P61864 (0-75)
  Domains in SCOPe 2.06: d3cmmb_
• Chain 'C':
  Compound: Ubiquitin-activating enzyme E1 1
  Species: SACCHAROMYCES CEREVISIAE
  Gene: UBA1
  Database cross-references and differences (RAF-indexed):
  • Uniprot P22515 (Start-1014)
• Chain 'D':
  Compound: Ubiquitin
  Species: SACCHAROMYCES CEREVISIAE
  Gene: UBI1, RPL40A
  Database cross-references and differences (RAF-indexed):
  • Uniprot P61864 (0-75)
  Domains in SCOPe 2.06: d3cmmd_
• Heterogens: PRO, HOH

PDB Chain Sequences:

• Chain 'A':
  No sequence available.
  
  
• Chain 'B':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >3cmmB (B:)
  mqifvktltgktitlevessdtidnvkskiqdkegippdqqrlifagkqledgrtlsdyn
  iqkestlhlvlrlrgg
  

  
  
• Chain 'C':
  No sequence available.
  
  
• Chain 'D':
  Sequence; same for both SEQRES and ATOM records: (download)
  

  >3cmmD (D:)
  mqifvktltgktitlevessdtidnvkskiqdkegippdqqrlifagkqledgrtlsdyn
  iqkestlhlvlrlrgg