PDB entry 3by4

View 3by4 on RCSB PDB site
Description: Structure of Ovarian Tumor (OTU) domain in complex with Ubiquitin
Class: cell cycle, hydrolase
Keywords: ubiquitin hydrolase, deubiquitinase, CELL CYCLE, HYDROLASE
Deposited on 2008-01-15, released 2008-02-19
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 1.55 Å
R-factor: 0.191
AEROSPACI score: 0.61 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Ubiquitin thioesterase OTU1
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Gene: Otu1
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: Ubiquitin
    Species: Homo sapiens [TaxId:9606]
    Gene: ubiquitin B
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3by4b_
  • Heterogens: 3CN, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence; same for both SEQRES and ATOM records: (download)
    >3by4B (B:)
    mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
    iqkestlhlvlrlrg