PDB entry 3bt2
View 3bt2 on RCSB PDB site
Description: Structure of urokinase receptor, urokinase and vitronectin complex
Class: immune system
Keywords: protein-protein interaction, Glycoprotein, GPI-anchor, Lipoprotein, Membrane, Receptor, Secreted, Blood coagulation, EGF-like domain, Fibrinolysis, Hydrolase, Kringle, Phosphoprotein, Plasminogen activation, Protease, Serine protease, Zymogen, Cell adhesion, Heparin-binding, Sulfation, Immunoglobulin domain, IMMUNE SYSTEM
Deposited on
2007-12-27, released
2008-03-25
The last revision prior to the SCOPe 2.03 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.23
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: urokinase-type plasminogen activator
Species: Homo sapiens [TaxId:9606]
Gene: PLAU
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3bt2a1, d3bt2a2 - Chain 'B':
Compound: Vitronectin
Species: Homo sapiens [TaxId:9606]
Gene: VTN
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3bt2b_ - Chain 'H':
Compound: anti-uPAR antibody, heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3bt2h1, d3bt2h2 - Chain 'L':
Compound: anti-uPAR antibody, light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3bt2l1, d3bt2l2 - Chain 'U':
Compound: Urokinase plasminogen activator surface receptor
Species: Homo sapiens [TaxId:9606]
Gene: PLAUR, MO3, UPAR
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d3bt2u1, d3bt2u2, d3bt2u3 - Heterogens: NAG, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3bt2A (A:)
rssnelhqvpsncdclnggtcvsnkyfsnihwcncpkkfggqhceidksktcyegnghfy
rgkastdtmgrpclpwnsatvlqqtyhahrsdalqlglgkhnycrnpdnrrrpwcyvqvg
lkplvqecmvhdcad
Sequence, based on observed residues (ATOM records): (download)
>3bt2A (A:)
sncdclnggtcvsnkyfsnihwcncpkkfggqhceidksktcyegnghfyrgkastdtmg
rpclpwnsatvlqqtyhahrsdalqlglgkhnycrnpdnrrrpwcyvqvglkplvqecmv
hdca
- Chain 'B':
Sequence; same for both SEQRES and ATOM records: (download)
>3bt2B (B:)
qesckgrctegfnvdkkcqcdelcsyyqscctdytaeckp
- Chain 'H':
Sequence, based on SEQRES records: (download)
>3bt2H (H:)
gvklqqsgpevvkpgasvkisckasgysftnfyihwvkqrpgqglewigwifhgsdntey
nekfkdkatltadtssstaymqlssltsedsavyfcarwgphwyfdvwgqgttvtvssak
ttppsvyplapgnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsss
vtvpsstwpsetvtcnvahpasstkvdkkiaaag
Sequence, based on observed residues (ATOM records): (download)
>3bt2H (H:)
gvklqqsgpevvkpgasvkisckasgysftnfyihwvkqrpgqglewigwifhgsdntey
nekfkdkatltadtssstaymqlssltsedsavyfcarwgphwyfdvwgqgttvtvssak
ttppsvyplapnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytlsssv
tvpsstwpsetvtcnvahpasstkvdkkiaaa
- Chain 'L':
Sequence, based on SEQRES records: (download)
>3bt2L (L:)
divltqspditaaslgqkvtitcsasssvsymhwyqqksgtspkpwifeisklasgvpar
fsgsgsgtsysltissmeaedaaiyycqqwnypftfgggtkleikradaaptvsifppss
eqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltlt
kdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>3bt2L (L:)
divltqspditaaslgqkvtitcsasssvsymhwyqqksgtspkpwifeisklasgvpar
fsgsgsgtsysltissmeaedaaiyycqqwnypftfgggtkleikradaaptvsifppss
eqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstltlt
kdeyerhnsytceathktstspivksfnrne
- Chain 'U':
Sequence, based on SEQRES records: (download)
>3bt2U (U:)
rslrcmqcktngdcrveecalgqdlcrttivrlweegeelelvekscthsektnrtlsyr
tglkitsltevvcgldlcnqgnsgravtysrsryleciscgssdmscergrhqslqcrsp
eeqcldvvthwiqegeegrpkddrhlrgcgylpgcpgsngfhnndtfhflkccnttkcne
gpilelenlpqngrqcysckgnsthgcsseetflidcrgpmnqclvatgthepknqsymv
rgcatasmcqhahlgdafsmnhidvscctksgcnhpdldvqyr
Sequence, based on observed residues (ATOM records): (download)
>3bt2U (U:)
slrcmqcktngdcrveecalgqdlcrttivrlweegeelelvekscthsektnrtlsyrt
glkitsltevvcgldlcnqgnysrsryleciscgssdmscergrhqslqcrspeeqcldv
vthwikddrhlrgcgylpgcpgsngfhnndtfhflkccnttkcnegpilelenlpqngrq
cysckgnsthgcsseetflidcrgpmnqclvatgthepknqsymvrgcatasmcqlgdaf
smnhidvscctksgcnhpd