PDB entry 3bq1
View 3bq1 on RCSB PDB site
Description: Insertion ternary complex of Dbh DNA polymerase
Class: transferase/DNA
Keywords: DNA polymerase, Y-family, lesion bypass, single-base deletion, -1 frameshift, DNA damage, DNA repair, DNA replication, DNA-binding, DNA-directed DNA polymerase, Magnesium, Metal-binding, Mutator protein, Nucleotidyltransferase, Transferase, TRANSFERASE-DNA complex
Deposited on
2007-12-19, released
2008-04-08
The last revision prior to the SCOPe 2.01 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: 0.207
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: DNA polymerase IV
Species: Sulfolobus acidocaldarius [TaxId:2285]
Gene: DBH
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3bq1a1, d3bq1a2 - Chain 'P':
Compound: DNA (5'-d(*dgp*dap*dap*dgp*dcp*dcp*dgp*dgp*dcp*dg)-3')
- Chain 'T':
Compound: DNA (5'-d(*dt*dtp*dcp*dcp*dgp*dcp*dcp*dcp*dgp*dgp*dcp*dtp*dtp*dcp*dc)-3')
- Heterogens: CA, DG3, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3bq1A (A:)
mivifvdfdyffaqveevlnpqykgkplvvcvysgrtktsgavatanyearklgvkagmp
iikamqiapsaiyvpmrkpiyeafsnrimnllnkhadkievasideayldvtnkvegnfe
ngielarkikqeilekekitvtvgvapnkilakiiadkskpnglgvirptevqdflneld
ideipgigsvlarrlnelgiqklrdilsknynelekitgkakalyllklaqnkysepven
kskiphgryltlpyntrdvkvilpylkkaineaynkvngipmritviaimedldilskgk
kfkhgisidnaykvaedllrellvrdkrrnvrrigvkldniiinktnlsdffdi
Sequence, based on observed residues (ATOM records): (download)
>3bq1A (A:)
mivifvdfdyffaqveevlnpqykgkplvvcvysgrtktsgavatanyearklgvkagmp
iikamqiapsaiyvpmrkpiyeafsnrimnllnkhadkievasideayldvtnkvegnfe
ngielarkikqeilekekitvtvgvapnkilakiiadkskpnglgvirptevqdflneld
ideipgigsvlarrlnelgiqklrdilsknynelekitgkakalyllklaqnkysepven
kskiphgryltlpyntrdvkvilpylkkaineaynkvngipmritviaimedldilskgk
kfkhgisidnaykvaedllrellvrdkrrnvrrigvkldniiin
- Chain 'P':
No sequence available.
- Chain 'T':
No sequence available.