PDB entry 3bf3

View 3bf3 on RCSB PDB site
Description: Type III pantothenate kinase from Thermotoga maritima complexed with product phosphopantothenate
Class: transferase
Keywords: actin-like fold, ATP-binding, Coenzyme A biosynthesis, Cytoplasm, Kinase, Metal-binding, Nucleotide-binding, Potassium, Transferase
Deposited on 2007-11-20, released 2008-06-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 1.63 Å
R-factor: 0.186
AEROSPACI score: 0.57 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Type III pantothenate kinase
    Species: THERMOTOGA MARITIMA
    Gene: coaX
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZY5 (3-End)
      • expression tag (0-2)
    Domains in SCOPe 2.08: d3bf3a1, d3bf3a2, d3bf3a3
  • Chain 'B':
    Compound: Type III pantothenate kinase
    Species: THERMOTOGA MARITIMA
    Gene: coaX
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZY5 (3-End)
      • expression tag (0-2)
    Domains in SCOPe 2.08: d3bf3b1, d3bf3b2, d3bf3b3
  • Chain 'C':
    Compound: Type III pantothenate kinase
    Species: THERMOTOGA MARITIMA
    Gene: coaX
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bf3c1, d3bf3c2
  • Chain 'D':
    Compound: Type III pantothenate kinase
    Species: THERMOTOGA MARITIMA
    Gene: coaX
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bf3d1, d3bf3d2
  • Chain 'E':
    Compound: Type III pantothenate kinase
    Species: THERMOTOGA MARITIMA
    Gene: coaX
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZY5 (3-End)
      • expression tag (0-2)
    Domains in SCOPe 2.08: d3bf3e1, d3bf3e2, d3bf3e3
  • Chain 'F':
    Compound: Type III pantothenate kinase
    Species: THERMOTOGA MARITIMA
    Gene: coaX
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9WZY5 (3-End)
      • expression tag (0-2)
    Domains in SCOPe 2.08: d3bf3f1, d3bf3f2, d3bf3f3
  • Heterogens: MG, PAZ, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3bf3A (A:)
    mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
    gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
    gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
    dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
    gvyhfcfgd
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bf3A (A:)
    mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
    gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
    gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
    dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
    gvyhfcfg
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3bf3B (B:)
    mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
    gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
    gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
    dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
    gvyhfcfgd
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bf3B (B:)
    mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
    gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
    gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
    dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
    gvyhfcfg
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3bf3C (C:)
    mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
    gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
    gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
    dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
    gvyhfcfgd
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bf3C (C:)
    myllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgigva
    svvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkeygkn
    giiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgkdte
    enirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltikgvy
    hfcfg
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3bf3D (D:)
    mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
    gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
    gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
    dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
    gvyhfcfgd
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bf3D (D:)
    myllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgigva
    svvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkeygkn
    giiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgkdte
    enirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltikgvy
    hfcfg
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >3bf3E (E:)
    mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
    gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
    gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
    dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
    gvyhfcfgd
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bf3E (E:)
    mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
    gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
    gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
    dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
    gvyhfcfg
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >3bf3F (F:)
    mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
    gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
    gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
    dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
    gvyhfcfgd
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bf3F (F:)
    mdpmyllvdvgnthsvfsitedgktfrrwrlstgvfqtedelfshlhpllgdamreikgi
    gvasvvptqntvierfsqkyfhispiwvkakngcvkwnvknpsevgadrvanvvafvkey
    gkngiiidmgtattvdlvvngsyeggailpgffmmvhslfrgtaklplvevkpadfvvgk
    dteenirlgvvngsvyalegiigrikevygdlpvvltggqskivkdmikheifdedltik
    gvyhfcfg