PDB entry 3ber
View 3ber on RCSB PDB site
Description: Human DEAD-box RNA-helicase DDX47, conserved domain I in complex with AMP
Class: hydrolase
Keywords: RNA HELICASE, DEAD, AMP, Structural Genomics, Structural Genomics Consortium, SGC, ATP-binding, Hydrolase, Nucleotide-binding, Nucleus, RNA-binding
Deposited on
2007-11-20, released
2007-12-04
The last revision prior to the SCOPe 2.08 freeze date was dated
2010-10-27, with a file datestamp of
2010-10-22.
Experiment type: XRAY
Resolution: 1.4 Å
R-factor: 0.167
AEROSPACI score: 0.7
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Probable ATP-dependent RNA helicase DDX47
Species: Homo sapiens [TaxId:9606]
Gene: DDX47
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3bera_ - Heterogens: PO4, AMP, PGE, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3berA (A:)
mhhhhhhssgvdlgtenlyfqsmeehdspteasqpiveeeetktfkdlgvtdvlceacdq
lgwtkptkiqieaiplalqgrdiiglaetgsgktgafalpilnalletpqrlfalvltpt
relafqiseqfealgssigvqsavivggidsmsqslalakkphiiiatpgrlidhlentk
gfnlralkylvmdeadrilnmdfetevdkilkviprdrktflfsatmtkkvqklqraalk
npvkcavss
Sequence, based on observed residues (ATOM records): (download)
>3berA (A:)
teasqpiveeeetktfkdlgvtdvlceacdqlgwtkptkiqieaiplalqgrdiiglaet
gsgktgafalpilnalletpqrlfalvltptrelafqiseqfealgssigvqsavivggi
dsmsqslalakkphiiiatpgrlidhlentkgfnlralkylvmdeadrilnmdfetevdk
ilkviprdrktflfsatmtkkvqklqraalknpvkcavss