PDB entry 3bdb
View 3bdb on RCSB PDB site
Description: Crystal Structure of Novel Immune-Type Receptor 11 Extracellular Fragment from Ictalurus punctatus including Stalk Region
Class: immune system
Keywords: Immunoglobulin Variable Domain-Like Beta-Sandwich, Immune-Type Receptor, Stalk Region, IMMUNE SYSTEM
Deposited on
2007-11-14, released
2008-06-24
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-10-25, with a file datestamp of
2017-10-20.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.13
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Novel immune-type receptor 11
Species: Ictalurus punctatus
Gene: NITR11
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3bdba_ - Chain 'B':
Compound: Novel immune-type receptor 11
Species: Ictalurus punctatus
Gene: NITR11
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3bdbb_ - Chain 'C':
Compound: Novel immune-type receptor 11
Species: Ictalurus punctatus
Gene: NITR11
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3bdbc_ - Chain 'D':
Compound: Novel immune-type receptor 11
Species: Ictalurus punctatus
Gene: NITR11
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3bdbd_ - Chain 'E':
Compound: Novel immune-type receptor 11
Species: Ictalurus punctatus
Gene: NITR11
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3bdbe_ - Chain 'F':
Compound: Novel immune-type receptor 11
Species: Ictalurus punctatus
Gene: NITR11
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d3bdbf_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3bdbA (A:)
mdikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfae
gfkdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegsks
sdgegsscpdqmhvlvw
Sequence, based on observed residues (ATOM records): (download)
>3bdbA (A:)
ikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfaegf
kdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegskssd
gegssc
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3bdbB (B:)
mdikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfae
gfkdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegsks
sdgegsscpdqmhvlvw
Sequence, based on observed residues (ATOM records): (download)
>3bdbB (B:)
ikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfaegf
kdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegskssd
gegssc
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3bdbC (C:)
mdikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfae
gfkdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegsks
sdgegsscpdqmhvlvw
Sequence, based on observed residues (ATOM records): (download)
>3bdbC (C:)
ikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfaegf
kdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegskssd
gegssc
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3bdbD (D:)
mdikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfae
gfkdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegsks
sdgegsscpdqmhvlvw
Sequence, based on observed residues (ATOM records): (download)
>3bdbD (D:)
ikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfaegf
kdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegskssd
gegssc
- Chain 'E':
Sequence, based on SEQRES records: (download)
>3bdbE (E:)
mdikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfae
gfkdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegsks
sdgegsscpdqmhvlvw
Sequence, based on observed residues (ATOM records): (download)
>3bdbE (E:)
ikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfaegf
kdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegskssd
gegssc
- Chain 'F':
Sequence, based on SEQRES records: (download)
>3bdbF (F:)
mdikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfae
gfkdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegsks
sdgegsscpdqmhvlvw
Sequence, based on observed residues (ATOM records): (download)
>3bdbF (F:)
ikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfaegf
kdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegskssd
gegssc