PDB entry 3bdb

View 3bdb on RCSB PDB site
Description: Crystal Structure of Novel Immune-Type Receptor 11 Extracellular Fragment from Ictalurus punctatus including Stalk Region
Class: immune system
Keywords: Immunoglobulin Variable Domain-Like Beta-Sandwich, Immune-Type Receptor, Stalk Region, IMMUNE SYSTEM
Deposited on 2007-11-14, released 2008-06-24
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-10-25, with a file datestamp of 2017-10-20.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: N/A
AEROSPACI score: 0.13 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Novel immune-type receptor 11
    Species: Ictalurus punctatus
    Gene: NITR11
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bdba_
  • Chain 'B':
    Compound: Novel immune-type receptor 11
    Species: Ictalurus punctatus
    Gene: NITR11
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bdbb_
  • Chain 'C':
    Compound: Novel immune-type receptor 11
    Species: Ictalurus punctatus
    Gene: NITR11
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bdbc_
  • Chain 'D':
    Compound: Novel immune-type receptor 11
    Species: Ictalurus punctatus
    Gene: NITR11
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bdbd_
  • Chain 'E':
    Compound: Novel immune-type receptor 11
    Species: Ictalurus punctatus
    Gene: NITR11
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bdbe_
  • Chain 'F':
    Compound: Novel immune-type receptor 11
    Species: Ictalurus punctatus
    Gene: NITR11
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3bdbf_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3bdbA (A:)
    mdikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfae
    gfkdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegsks
    sdgegsscpdqmhvlvw
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bdbA (A:)
    ikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfaegf
    kdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegskssd
    gegssc
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3bdbB (B:)
    mdikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfae
    gfkdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegsks
    sdgegsscpdqmhvlvw
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bdbB (B:)
    ikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfaegf
    kdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegskssd
    gegssc
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3bdbC (C:)
    mdikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfae
    gfkdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegsks
    sdgegsscpdqmhvlvw
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bdbC (C:)
    ikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfaegf
    kdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegskssd
    gegssc
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3bdbD (D:)
    mdikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfae
    gfkdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegsks
    sdgegsscpdqmhvlvw
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bdbD (D:)
    ikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfaegf
    kdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegskssd
    gegssc
    

  • Chain 'E':
    Sequence, based on SEQRES records: (download)
    >3bdbE (E:)
    mdikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfae
    gfkdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegsks
    sdgegsscpdqmhvlvw
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bdbE (E:)
    ikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfaegf
    kdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegskssd
    gegssc
    

  • Chain 'F':
    Sequence, based on SEQRES records: (download)
    >3bdbF (F:)
    mdikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfae
    gfkdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegsks
    sdgegsscpdqmhvlvw
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bdbF (F:)
    ikelhvktvkrgenvtmecsmskvtnknnlawyrqsfgkvpqyfvryyssnsgykfaegf
    kdsrfsmtvndqkfdlniigareddggeyfcgevegiiikftsgtrlqfegsnegskssd
    gegssc