PDB entry 3bd9

View 3bd9 on RCSB PDB site
Description: human 3-O-sulfotransferase isoform 5 with bound PAP
Class: transferase
Keywords: 3-O-sulfotransferase, heparan sulfate, heparan sulfate biosynthesis, substrate specificity, Glycoprotein, Golgi apparatus, Membrane, Signal-anchor, Transmembrane
Deposited on 2007-11-14, released 2008-01-29
The last revision prior to the SCOPe 2.05 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.203
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Heparan sulfate glucosamine 3-O-sulfotransferase 5
    Species: Homo sapiens [TaxId:9606]
    Gene: HS3ST5, 3OST5, HS3OST5
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q8IZT8 (21-279)
      • expression tag (18-20)
      • engineered (232)
    Domains in SCOPe 2.05: d3bd9a_
  • Heterogens: A3P, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3bd9A (A:)
    mgsshhhhhhssglvprgshmqqlpkaiiigvrkggtrallemlnlhpavvkasqeihff
    dndenygkgiewyrkkmpfsypqqitiekspayfiteevperiykmnssiklliivrept
    traisdytqvlegkerknktyykfeklaidpntcevntkykavrtsiytkhlerwlkyfp
    ieqfhvvdgdrliteplpelqlvekflnlpprisqynlyfnatrgfyclrfneifnkcla
    gskgrihpevdpsvitklrkffhpfnqkfyqitgrtlnwp
    

    Sequence, based on observed residues (ATOM records): (download)
    >3bd9A (A:)
    shmqqlpkaiiigvrkggtrallemlnlhpavvkasqeihffdndenygkgiewyrkkmp
    fsypqqitiekspayfiteevperiykmnssiklliivrepttraisdytqvlegkerkn
    ktyykfeklaidpntcevntkykavrtsiytkhlerwlkyfpieqfhvvdgdrliteplp
    elqlvekflnlpprisqynlyfnatrgfyclrfneifnkclarihpevdpsvitklrkff
    hpfnqkfyqitgrtlnwp