PDB entry 3bd9
View 3bd9 on RCSB PDB site
Description: human 3-O-sulfotransferase isoform 5 with bound PAP
Class: transferase
Keywords: 3-O-sulfotransferase, heparan sulfate, heparan sulfate biosynthesis, substrate specificity, Glycoprotein, Golgi apparatus, Membrane, Signal-anchor, Transmembrane
Deposited on
2007-11-14, released
2008-01-29
The last revision prior to the SCOPe 2.05 freeze date was dated
2009-02-24, with a file datestamp of
2009-03-01.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.203
AEROSPACI score: 0.37
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Heparan sulfate glucosamine 3-O-sulfotransferase 5
Species: Homo sapiens [TaxId:9606]
Gene: HS3ST5, 3OST5, HS3OST5
Database cross-references and differences (RAF-indexed):
- Uniprot Q8IZT8 (21-279)
- expression tag (18-20)
- engineered (232)
Domains in SCOPe 2.05: d3bd9a_ - Heterogens: A3P, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3bd9A (A:)
mgsshhhhhhssglvprgshmqqlpkaiiigvrkggtrallemlnlhpavvkasqeihff
dndenygkgiewyrkkmpfsypqqitiekspayfiteevperiykmnssiklliivrept
traisdytqvlegkerknktyykfeklaidpntcevntkykavrtsiytkhlerwlkyfp
ieqfhvvdgdrliteplpelqlvekflnlpprisqynlyfnatrgfyclrfneifnkcla
gskgrihpevdpsvitklrkffhpfnqkfyqitgrtlnwp
Sequence, based on observed residues (ATOM records): (download)
>3bd9A (A:)
shmqqlpkaiiigvrkggtrallemlnlhpavvkasqeihffdndenygkgiewyrkkmp
fsypqqitiekspayfiteevperiykmnssiklliivrepttraisdytqvlegkerkn
ktyykfeklaidpntcevntkykavrtsiytkhlerwlkyfpieqfhvvdgdrliteplp
elqlvekflnlpprisqynlyfnatrgfyclrfneifnkclarihpevdpsvitklrkff
hpfnqkfyqitgrtlnwp