PDB entry 3b98

View 3b98 on RCSB PDB site
Description: Crystal structure of zebrafish prostacyclin synthase (cytochrome P450 8A1)
Class: isomerase
Keywords: prostacyclin synthase, cytochrome p450 8A1, CYP8A1, ISOMERASE
Deposited on 2007-11-03, released 2007-11-20
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-03-01.
Experiment type: XRAY
Resolution: 2.08 Å
R-factor: 0.229
AEROSPACI score: 0.4 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Prostaglandin I2 synthase
    Species: Danio rerio [TaxId:7955]
    Gene: PGIS
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3b98a_
  • Chain 'B':
    Compound: Prostaglandin I2 synthase
    Species: Danio rerio [TaxId:7955]
    Gene: PGIS
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d3b98b_
  • Heterogens: HEM, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3b98A (A:)
makktssvlygrrtrrrneppldkgmipwlghalefgkdaakfltrmkekhgdiftvraa
glyitvlldsncydavlsdvasldqtsyaqvlmkrifnmilpshnpesekkraemhfqga
sltqlsnsmqnnlrllmtpsemglktsewkkdglfnlcysllfktgyltvfgaennnsaa
ltqiyeefrrfdkllpklarttvnkeekqiasaareklwkwltpsgldrkpreqswlgsy
vkqlqdegidaemqrramllqlwvtqgnagpaafwvmgyllthpealravreeiqggkhl
rleerqkntpvfdsvlwetlrltaaalitrdvtqdkkiclsngqeyhlrrgdrlcvfpfi
spqmdpqihqqpemfqfdrflnadrtekkdffkngarvkypsvpwgtednlcpgrhfavh
aikelvftiltrfdvelcdknatvplvdpsrygfgilqpagdleiryrirfhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3b98A (A:)
rtrrrneppldkgmipwlghalefgkdaakfltrmkekhgdiftvraaglyitvlldsnc
ydavlsdvasldqtsyaqvlmkrifnmilpshnpesekkraemhfqgasltqlsnsmqnn
lrllmtpsemglktsewkkdglfnlcysllfktgyltvfgaennnsaaltqiyeefrrfd
kllpklarttvnkeekqiasaareklwkwltpsgldrkpreqswlgsyvkqlqdegidae
mqrramllqlwvtqgnagpaafwvmgyllthpealravreeiqntpvfdsvlwetlrlta
aalitrdvtqdkkiclsngqeyhlrrgdrlcvfpfispqmdpqihqqpemfqfdrflnad
rtekkdffkngarvkypsvpwgtednlcpgrhfavhaikelvftiltrfdvelcdknatv
plvdpsrygfgilqpagdleiryrir

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3b98B (B:)
makktssvlygrrtrrrneppldkgmipwlghalefgkdaakfltrmkekhgdiftvraa
glyitvlldsncydavlsdvasldqtsyaqvlmkrifnmilpshnpesekkraemhfqga
sltqlsnsmqnnlrllmtpsemglktsewkkdglfnlcysllfktgyltvfgaennnsaa
ltqiyeefrrfdkllpklarttvnkeekqiasaareklwkwltpsgldrkpreqswlgsy
vkqlqdegidaemqrramllqlwvtqgnagpaafwvmgyllthpealravreeiqggkhl
rleerqkntpvfdsvlwetlrltaaalitrdvtqdkkiclsngqeyhlrrgdrlcvfpfi
spqmdpqihqqpemfqfdrflnadrtekkdffkngarvkypsvpwgtednlcpgrhfavh
aikelvftiltrfdvelcdknatvplvdpsrygfgilqpagdleiryrirfhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >3b98B (B:)
rtrrrneppldkgmipwlghalefgkdaakfltrmkekhgdiftvraaglyitvlldsnc
ydavlsdvasldqtsyaqvlmkrifnmilpshnpesekkraemhfqgasltqlsnsmqnn
lrllmtpsemglkwkkdglfnlcysllfktgyltvfgasaaltqiyeefrrfdkllpkla
rttvnkeekqiasaareklwkwlswlgsyvkqlqdegidaemqrramllqlwvtqgnagp
aafwvmgyllthpealravreeiqntpvfdsvlwetlrltaaalitrdvtqdkkiclsng
qeyhlrrgdrlcvfpfispqmdpqihqqpemfqfdrflnadrtekkdffkngarvkypsv
pwgtednlcpgrhfavhaikelvftiltrfdvelcdknatvplvdpsrygfgilqpagdl
eiryrir