PDB entry 3b1u

View 3b1u on RCSB PDB site
Description: Crystal structure of human peptidylarginine deiminase 4 in complex with o-F-amidine
Class: hydrolase/hydrolase inhibitor
Keywords: nuclei, HYDROLASE-HYDROLASE INHIBITOR complex
Deposited on 2011-07-13, released 2011-10-26
The last revision prior to the SCOPe 2.07 freeze date was dated 2011-10-26, with a file datestamp of 2011-10-21.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.221
AEROSPACI score: 0.38 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein-arginine deiminase type-4
    Species: Homo sapiens [TaxId:9606]
    Gene: PADI4, PADI5, PDI5
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UM07 (Start-670)
      • see remark 999 (89)
      • see remark 999 (119)
    Domains in SCOPe 2.07: d3b1ua1, d3b1ua2, d3b1ua3
  • Heterogens: YFF, SO4, CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3b1uA (A:)
gplgspefmaqgtlirvtpeqpthavcvlgtltqldicssapedctsfsinaspgvvvdi
ahsppakkkstgsstwpldpgvevtltmkaasgstgdqkvqisyygpktppvkallylta
veislcaditrtgkvkptravkdqrtwtwgpcgqgaillvncdrdnlessamdceddevl
dsedlqdmslmtlstktpkdfftnhtlvlhvarsemdkvrvfqatrgklsskcsvvlgpk
wpshylmvpggkhnmdfyvealafpdtdfpglitltislldtsnlelpeavvfqdsvvfr
vapwimtpntqppqevyacsifenedflksvttlamkakcklticpeeenmddqwmqdem
eigyiqaphktlpvvfdsprnrglkefpikrvmgpdfgyvtrgpqtggisgldsfgnlev
sppvtvrgkeyplgrilfgdscypsndsrqmhqalqdflsaqqvqapvklysdwlsvghv
deflsfvpapdrkgfrlllasprscyklfqeqqneghgeallfegikkkkqqkiknilsn
ktlrehnsfvercidwnrellkrelglaesdiidipqlfklkefskaeaffpnmvnmlvl
gkhlgipkpfgpvingrccleekvcslleplglqctfindfftyhirhgevhcgtnvrrk
pfsfkwwnmvp

    Sequence, based on observed residues (ATOM records): (download) 
    >3b1uA (A:)
gtlirvtpeqpthavcvlgtltqldicssapetsfsinaspgvvvditwpldpgvevtlt
mkaasgstgdqkvqisyygpktppvkallyltaveislcaditrtgkqrtwtwgpcgqga
illvncdrdnlessamdceddevldsedlqdmslmtlstktpkdfftnhtlvlhvarsem
dkvrvfqatcsvvlgpkwpshylmvpggkhnmdfyvealafpdtdfpglitltislldts
nlelpeavvfqdsvvfrvapwimtpntqppqevyacsifenedflksvttlamkakcklt
icpeeenmddqwmqdemeigyiqaphktlpvvfdsprnrglkefpikrvmgpdfgyvtrg
pqtggisgldsfgnlevsppvtvrgkeyplgrilfgdscypsndsrqmhqalqdflsaqq
vqapvklysdwlsvghvdeflsfvpapdrkgfrlllasprscyklfqeqqneghgeallf
egikkkkqqkiknilsnktlrehnsfvercidwnrellkrelglaesdiidipqlfklke
fskaeaffpnmvnmlvlgkhlgipkpfgpvingrccleekvcslleplglqctfindfft
yhirhgevhcgtnvrrkpfsfkwwnmvp