PDB entry 3ap6
View 3ap6 on RCSB PDB site
Description: Crystal structure of the galectin-8 N-terminal carbohydrate recognition domain in complex with lactose 3'-sulfate
Class: Sugar Binding Protein
Keywords: Beta-Sandwich, Galectin, Carbohydrate/Sugar Binding, Sugar Binding Protein
Deposited on
2010-10-12, released
2011-01-26
The last revision prior to the SCOPe 2.01 freeze date was dated
2011-01-26, with a file datestamp of
2011-01-21.
Experiment type: XRAY
Resolution: 1.58 Å
R-factor: 0.202
AEROSPACI score: 0.58
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Galectin-8
Species: Homo sapiens [TaxId:9606]
Gene: LGALS8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3ap6a_ - Chain 'B':
Compound: Galectin-8
Species: Homo sapiens [TaxId:9606]
Gene: LGALS8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3ap6b_ - Chain 'C':
Compound: Galectin-8
Species: Homo sapiens [TaxId:9606]
Gene: LGALS8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3ap6c_ - Chain 'D':
Compound: Galectin-8
Species: Homo sapiens [TaxId:9606]
Gene: LGALS8
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.01: d3ap6d_ - Heterogens: LAT, SO4, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>3ap6A (A:)
mmlslnnlqniiynpvipfvgtipdqldpgtlivirghvpsdadrfqvdlqngssvkpra
dvafhfnprfkragcivcntlinekwgreeitydtpfkreksfeivimvlkdkfqvavng
khtllyghrigpekidtlgiygkvnihsigfsfs
Sequence, based on observed residues (ATOM records): (download)
>3ap6A (A:)
lqniiynpvipfvgtipdqldpgtlivirghvpsdadrfqvdlqngssvkpradvafhfn
prfkragcivcntlinekwgreeitydtpfkreksfeivimvlkdkfqvavngkhtllyg
hrigpekidtlgiygkvnihsigfsf
- Chain 'B':
Sequence, based on SEQRES records: (download)
>3ap6B (B:)
mmlslnnlqniiynpvipfvgtipdqldpgtlivirghvpsdadrfqvdlqngssvkpra
dvafhfnprfkragcivcntlinekwgreeitydtpfkreksfeivimvlkdkfqvavng
khtllyghrigpekidtlgiygkvnihsigfsfs
Sequence, based on observed residues (ATOM records): (download)
>3ap6B (B:)
qniiynpvipfvgtipdqldpgtlivirghvpsdadrfqvdlqngssvkpradvafhfnp
rfkragcivcntlinekwgreeitydtpfkreksfeivimvlkdkfqvavngkhtllygh
rigpekidtlgiygkvnihsigfsf
- Chain 'C':
Sequence, based on SEQRES records: (download)
>3ap6C (C:)
mmlslnnlqniiynpvipfvgtipdqldpgtlivirghvpsdadrfqvdlqngssvkpra
dvafhfnprfkragcivcntlinekwgreeitydtpfkreksfeivimvlkdkfqvavng
khtllyghrigpekidtlgiygkvnihsigfsfs
Sequence, based on observed residues (ATOM records): (download)
>3ap6C (C:)
lqniiynpvipfvgtipdqldpgtlivirghvpsdadrfqvdlqngssvkpradvafhfn
prfkragcivcntlinekwgreeitydtpfkreksfeivimvlkdkfqvavngkhtllyg
hrigpekidtlgiygkvnihsigfs
- Chain 'D':
Sequence, based on SEQRES records: (download)
>3ap6D (D:)
mmlslnnlqniiynpvipfvgtipdqldpgtlivirghvpsdadrfqvdlqngssvkpra
dvafhfnprfkragcivcntlinekwgreeitydtpfkreksfeivimvlkdkfqvavng
khtllyghrigpekidtlgiygkvnihsigfsfs
Sequence, based on observed residues (ATOM records): (download)
>3ap6D (D:)
lqniiynpvipfvgtipdqldpgtlivirghvpsdadrfqvdlqngssvkpradvafhfn
prfkragcivcntlinekwgreeitydtpfkreksfeivimvlkdkfqvavngkhtllyg
hrigpekidtlgiygkvnihsigfsfs