PDB entry 3amd

View 3amd on RCSB PDB site
Description: Crystal structures of Thermotoga maritima Cel5A, apo form and tetramer/au
Class: hydrolase
Keywords: glycosyl hydrolase family 5, cellulase, biofuel, hyperthermostable, TIM-barrel, hydrolase
Deposited on 2010-08-19, released 2011-08-10
The last revision prior to the SCOPe 2.06 freeze date was dated 2013-06-05, with a file datestamp of 2013-05-31.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.168
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: endoglucanase
    Species: THERMOTOGA MARITIMA [TaxId:243274]
    Gene: TM_1751
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3amda_
  • Chain 'B':
    Compound: endoglucanase
    Species: THERMOTOGA MARITIMA [TaxId:243274]
    Gene: TM_1751
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3amdb_
  • Chain 'C':
    Compound: endoglucanase
    Species: THERMOTOGA MARITIMA [TaxId:243274]
    Gene: TM_1751
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3amdc_
  • Chain 'D':
    Compound: endoglucanase
    Species: THERMOTOGA MARITIMA [TaxId:243274]
    Gene: TM_1751
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3amdd_
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >3amdA (A:)
    mgvdpfernkilgrginignaleapnegdwgvvikdeffdiikeagfshvripirwstha
    yafppykimdrffkrvdevingalkrglavvinihhyeelmndpeehkerflalwkqiad
    rykdypetlffeilnephgnltpekwnelleealkvirsidkkhtiiigtaewggisale
    klsvpkweknsivtihyynpfefthqgaewvegsekwlgrkwgspddqkhlieefnfiee
    wskknkrpiyigefgayrkadlesrikwtsfvvremekrrwswaywefcsgfgvydtlrk
    twnkdllealiggdsie
    

    Sequence, based on observed residues (ATOM records): (download)
    >3amdA (A:)
    gvdpfernkilgrginignaleapnegdwgvvikdeffdiikeagfshvripirwsthay
    afppykimdrffkrvdevingalkrglavvinihhyeelmndpeehkerflalwkqiadr
    ykdypetlffeilnephgnltpekwnelleealkvirsidkkhtiiigtaewggisalek
    lsvpkweknsivtihyynpfefthqgaewvegsekwlgrkwgspddqkhlieefnfieew
    skknkrpiyigefgayrkadlesrikwtsfvvremekrrwswaywefcsgfgvydtlrkt
    wnkdllealig
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >3amdB (B:)
    mgvdpfernkilgrginignaleapnegdwgvvikdeffdiikeagfshvripirwstha
    yafppykimdrffkrvdevingalkrglavvinihhyeelmndpeehkerflalwkqiad
    rykdypetlffeilnephgnltpekwnelleealkvirsidkkhtiiigtaewggisale
    klsvpkweknsivtihyynpfefthqgaewvegsekwlgrkwgspddqkhlieefnfiee
    wskknkrpiyigefgayrkadlesrikwtsfvvremekrrwswaywefcsgfgvydtlrk
    twnkdllealiggdsie
    

    Sequence, based on observed residues (ATOM records): (download)
    >3amdB (B:)
    mgvdpfernkilgrginignaleapnegdwgvvikdeffdiikeagfshvripirwstha
    yafppykimdrffkrvdevingalkrglavvinihhyeelmndpeehkerflalwkqiad
    rykdypetlffeilnephgnltpekwnelleealkvirsidkkhtiiigtaewggisale
    klsvpkweknsivtihyynpfefthqgaewvegsekwlgrkwgspddqkhlieefnfiee
    wskknkrpiyigefgayrkadlesrikwtsfvvremekrrwswaywefcsgfgvydtlrk
    twnkdllealig
    

  • Chain 'C':
    Sequence, based on SEQRES records: (download)
    >3amdC (C:)
    mgvdpfernkilgrginignaleapnegdwgvvikdeffdiikeagfshvripirwstha
    yafppykimdrffkrvdevingalkrglavvinihhyeelmndpeehkerflalwkqiad
    rykdypetlffeilnephgnltpekwnelleealkvirsidkkhtiiigtaewggisale
    klsvpkweknsivtihyynpfefthqgaewvegsekwlgrkwgspddqkhlieefnfiee
    wskknkrpiyigefgayrkadlesrikwtsfvvremekrrwswaywefcsgfgvydtlrk
    twnkdllealiggdsie
    

    Sequence, based on observed residues (ATOM records): (download)
    >3amdC (C:)
    vdpfernkilgrginignaleapnegdwgvvikdeffdiikeagfshvripirwsthaya
    fppykimdrffkrvdevingalkrglavvinihhyeelmndpeehkerflalwkqiadry
    kdypetlffeilnephgnltpekwnelleealkvirsidkkhtiiigtaewggisalekl
    svpkweknsivtihyynpfefthqgaewvegsekwlgrkwgspddqkhlieefnfieews
    kknkrpiyigefgayrkadlesrikwtsfvvremekrrwswaywefcsgfgvydtlrktw
    nkdlleali
    

  • Chain 'D':
    Sequence, based on SEQRES records: (download)
    >3amdD (D:)
    mgvdpfernkilgrginignaleapnegdwgvvikdeffdiikeagfshvripirwstha
    yafppykimdrffkrvdevingalkrglavvinihhyeelmndpeehkerflalwkqiad
    rykdypetlffeilnephgnltpekwnelleealkvirsidkkhtiiigtaewggisale
    klsvpkweknsivtihyynpfefthqgaewvegsekwlgrkwgspddqkhlieefnfiee
    wskknkrpiyigefgayrkadlesrikwtsfvvremekrrwswaywefcsgfgvydtlrk
    twnkdllealiggdsie
    

    Sequence, based on observed residues (ATOM records): (download)
    >3amdD (D:)
    gvdpfernkilgrginignaleapnegdwgvvikdeffdiikeagfshvripirwsthay
    afppykimdrffkrvdevingalkrglavvinihhyeelmndpeehkerflalwkqiadr
    ykdypetlffeilnephgnltpekwnelleealkvirsidkkhtiiigtaewggisalek
    lsvpkweknsivtihyynpfefthqgaewvegsekwlgrkwgspddqkhlieefnfieew
    skknkrpiyigefgayrkadlesrikwtsfvvremekrrwswaywefcsgfgvydtlrkt
    wnkdllealig