PDB entry 3a4t

View 3a4t on RCSB PDB site
Description: Crystal structure of aTrm4 from M.jannaschii with sinefungin
Class: transferase
Keywords: tRNA,m5C,Rossmann fold, Structural Genomics,RSGI, RIKEN Structural Genomics/Proteomics Initiative, Methyltransferase, S-adenosyl-L-methionine, Transferase
Deposited on 2009-07-14, released 2010-06-30
The last revision prior to the SCOPe 2.06 freeze date was dated 2010-12-01, with a file datestamp of 2010-11-26.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.186
AEROSPACI score: 0.37 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Putative methyltransferase MJ0026
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: MJ0026
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3a4ta_
  • Chain 'B':
    Compound: Putative methyltransferase MJ0026
    Species: Methanocaldococcus jannaschii [TaxId:2190]
    Gene: MJ0026
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.06: d3a4tb_
  • Heterogens: SFG, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >3a4tA (A:)
mmivykgekmqfirvntlkinpevlkkrlenkgvvlektfldyafevkkspfsigstpey
lfgyympqsissmippivlnpreddfildmcaapggktthlaqlmknkgtivaveisktr
tkalksninrmgvlntiiinadmrkykdyllkneiffdkilldapcsgniikdknrnvse
edikycslrqkelidigidllkkdgelvystcsmeveeneevikyilqkrndveliiika
nefkginikegyikgtlrvfppnepffiaklrki

    Sequence, based on observed residues (ATOM records): (download) 
    >3a4tA (A:)
kmqfirvntlkinpevlkkrlenkgvvlektfldyafevkkspfsigstpeylfgyympq
sissmippivlnpreddfildmcaapggktthlaqlmknkgtivaveisktrtkalksni
nrmgvlntiiinadmrkykdyllkneiffdkilldapcsgniseedikycslrqkelidi
gidllkkdgelvystcsmeveeneevikyilqkrndveliiikanefkginikegyikgt
lrvfppnepffiaklrki

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >3a4tB (B:)
mmivykgekmqfirvntlkinpevlkkrlenkgvvlektfldyafevkkspfsigstpey
lfgyympqsissmippivlnpreddfildmcaapggktthlaqlmknkgtivaveisktr
tkalksninrmgvlntiiinadmrkykdyllkneiffdkilldapcsgniikdknrnvse
edikycslrqkelidigidllkkdgelvystcsmeveeneevikyilqkrndveliiika
nefkginikegyikgtlrvfppnepffiaklrki

    Sequence, based on observed residues (ATOM records): (download) 
    >3a4tB (B:)
mqfirvntlkinpevlkkrlenkgvvlektfldyafevkkspfsigstpeylfgyympqs
issmippivlnpreddfildmcaapggktthlaqlmknkgtivaveisktrtkalksnin
rmgvlntiiinadmrkykdyllkneiffdkilldapcsgndikycslrqkelidigidll
kkdgelvystcsmeveeneevikyilqkrndveliiikanefkginikegyikgtlrvfp
pnepffiaklrki