PDB entry 2zvo
View 2zvo on RCSB PDB site
Description: NEMO CoZi domain in complex with diubiquitin in C2 space group
Class: Transcription/SIGNALING PROTEIN
Keywords: NF-kB signaling, Ubiquitin binding, Coiled coil, Cytoplasm, Metal-binding, Nucleus, Phosphoprotein, Transcription, Transcription regulation, Ubl conjugation, Zinc, Zinc-finger, Transcription-SIGNALING PROTEIN COMPLEX
Deposited on
2008-11-12, released
2009-03-24
The last revision prior to the SCOPe 2.08 freeze date was dated
2017-10-11, with a file datestamp of
2017-10-06.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.14
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: UBC protein
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2zvoa1, d2zvoa2, d2zvoa3 - Chain 'B':
Compound: NF-kappa-B essential modulator
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot O88522 (2-End)
- engineered (34)
- engineered (37)
- Chain 'D':
Compound: NF-kappa-B essential modulator
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Uniprot O88522 (2-End)
- engineered (34)
- engineered (37)
- Chain 'G':
Compound: UBC protein
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2zvog1, d2zvog2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2zvoA (A:)
gsmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsd
yniqkestlhlvlrlrggmqifvktltgktitlevepsdtienvkakiqdkegippdqqr
lifagkqledgrtlsdyniqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>2zvoA (A:)
smqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdy
niqkestlhlvlrlrggmqifvktltgktitlevepsdtienvkakiqdkegippdqqrl
ifagkqledgrtlsdyniqkestlhlvlr
- Chain 'B':
No sequence available.
- Chain 'D':
No sequence available.
- Chain 'G':
Sequence, based on SEQRES records: (download)
>2zvoG (G:)
gsmqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsd
yniqkestlhlvlrlrggmqifvktltgktitlevepsdtienvkakiqdkegippdqqr
lifagkqledgrtlsdyniqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>2zvoG (G:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrggmqifvktltgktitlevepsdtienvkakiqdkegippdqqrli
fagkqledgrtlsdyniqkestlhlv