PDB entry 2z8l

View 2z8l on RCSB PDB site
Description: Crystal Structure of the Staphylococcal superantigen-like protein SSL5 at pH 4.6 complexed with sialyl Lewis X
Class: sugar binding protein
Keywords: OB fold, B-grasp, SUGAR BINDING PROTEIN
Deposited on 2007-09-06, released 2007-11-27
The last revision prior to the SCOP 1.75 freeze date was dated 2007-12-11, with a file datestamp of 2007-12-07.
Experiment type: XRAY
Resolution: 1.65 Å
R-factor: 0.183
AEROSPACI score: 0.69 (click here for full SPACI score report)

Chains and heterogens:

• Chain 'A':
  Compound: Exotoxin 3
  Species: Staphylococcus aureus
  Gene: ssl5
  Database cross-references and differences (RAF-indexed):
  • Uniprot Q9ZFS6 (Start-207)
    • see remark 999 (26)
    • see remark 999 (52-53)
    • see remark 999 (68)
    • see remark 999 (70)
    • see remark 999 (92)
    • see remark 999 (110)
    • see remark 999 (113)
    • see remark 999 (121)
    • see remark 999 (125-126)
    • see remark 999 (131)
    • see remark 999 (138)
    • see remark 999 (154)
    • see remark 999 (164)
    • see remark 999 (170)
    • see remark 999 (187-188)
    • see remark 999 (202)
  Domains in SCOP 1.75: d2z8la1, d2z8la2
• Heterogens: PO4, GOL, HOH

PDB Chain Sequences:

• Chain 'A':
  Sequence, based on SEQRES records: (download)
  

  >2z8lA (A:)
  gpgssehkakyenvtkdifdlrdyysgaskelknvtgyryskggkhylifdkhqkftriq
  ifgkdierlktrknpgldifvvkeaenrngtvfsyggvtkknqgayydylnapkfvikke
  vdagvythvkrhyiykeevslkeldfklrqyliqnfdlykkfpkdskikvimkdggyytf
  elnkklqphrmsdvidgrniekmeanir
  

  
  Sequence, based on observed residues (ATOM records): (download)
  

  >2z8lA (A:)
  difdlrdyysgaskelknvtgyryskggkhylifdkhqkftriqifgkdierlktrknpg
  ldifvvkeaenrngtvfsyggvtkknqgayydylnapkfvikkevdagvythvkrhyiyk
  eevslkeldfklrqyliqnfdlykkfpkdskikvimkdggyytfelnkklqphrmsdvid
  grniekmeanir