PDB entry 2z2m

View 2z2m on RCSB PDB site
Description: Cefditoren-Acylated Penicillin-Binding Protein 2X (PBP2X) from Streptococcus pneumoniae
Class: biosynthetic protein
Keywords: peptidoglycan synthesis, cell wall, penicillin-binding, antibiotics, cefditoren, biosynthetic protein
Deposited on 2007-05-23, released 2007-09-04
The last revision prior to the SCOPe 2.04 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.6 Å
R-factor: 0.223
AEROSPACI score: 0.28 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: penicillin-binding protein 2x
    Species: Streptococcus pneumoniae [TaxId:1313]
    Gene: PBPX
    Database cross-references and differences (RAF-indexed):
  • Chain 'B':
    Compound: penicillin-binding protein 2x
    Species: Streptococcus pneumoniae [TaxId:1313]
    Gene: PBPX
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2z2mb_
  • Chain 'C':
    Compound: penicillin-binding protein 2x
    Species: Streptococcus pneumoniae [TaxId:1313]
    Gene: PBPX
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2z2mc1, d2z2mc2
  • Chain 'D':
    Compound: penicillin-binding protein 2x
    Species: Streptococcus pneumoniae [TaxId:1313]
    Gene: PBPX
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: penicillin-binding protein 2x
    Species: Streptococcus pneumoniae [TaxId:1313]
    Gene: PBPX
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2z2me_
  • Chain 'F':
    Compound: penicillin-binding protein 2x
    Species: Streptococcus pneumoniae [TaxId:1313]
    Gene: PBPX
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.04: d2z2mf1, d2z2mf2
  • Heterogens: SO4, CDS, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2z2mB (B:)
lgnivpgteqvsqrtmdgkdvyttissplqsfmetqmdafqekvkgkymtatlvsaktge
ilattqrptfdadtkegitedfvwrdilyqsnyepgstmkvmmlaaaidnntfpggevfn
sselkiadatirdwdvnegltggrmmtfsqgfahssnvgmtlleqkmgdatwldylnrfk
fgvptrfgltdeyagqlpadnivniaqssfgqgisvtqtqmiraftaiandgvmlepkfi
saiydpndqtarksqkeivgnpvskdaasltrtnmvlvgtdpvygtmynhstgkptvtvp
gqnvalksgtaqiadeknggylvgltdyifsavsmspaenpdfilyvtvqqpehysgiql
gefanpilerasamkdslnlqttak

    Sequence, based on observed residues (ATOM records): (download) 
    >2z2mB (B:)
rtmdgkdvyttissplqsfmetqmdafqekvkgkymtatlvsaktgeilattqrptfdad
tkegitedfvwrdilyqsnyepgstmkvmmlaaaidnntfpggevfnsselkiadatird
wdvnegltggrmmtfsqgfahssnvgmtlleqkmgdatwldylnrfkfgvptrfgltdey
agqlpadnivniaqssfgqgisvtqtqmiraftaiandgvmlepkfisaiydpndqtark
sqkeivgnpvskdaasltrtnmvlvgtdpvygtmynhstgkptvtvpgqnvalksgtaqi
adgylvgltdyifsavsmspaenpdfilyvtvqqpehysgiqlgefanpilerasamkds
lnl

  • Chain 'C':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2z2mC (C:)
aleqvsqqspypmpsvkdispgdlaeelrrnlvqpivvgtgtkiknssaeegknlapnqq
vlilsdkaeevpdmygwtketaetlakwlnielefqgsgstvqkqdvrantaikdikkit
ltlgd

  • Chain 'D':
    No sequence available.

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2z2mE (E:)
lgnivpgteqvsqrtmdgkdvyttissplqsfmetqmdafqekvkgkymtatlvsaktge
ilattqrptfdadtkegitedfvwrdilyqsnyepgstmkvmmlaaaidnntfpggevfn
sselkiadatirdwdvnegltggrmmtfsqgfahssnvgmtlleqkmgdatwldylnrfk
fgvptrfgltdeyagqlpadnivniaqssfgqgisvtqtqmiraftaiandgvmlepkfi
saiydpndqtarksqkeivgnpvskdaasltrtnmvlvgtdpvygtmynhstgkptvtvp
gqnvalksgtaqiadeknggylvgltdyifsavsmspaenpdfilyvtvqqpehysgiql
gefanpilerasamkdslnlqttak

    Sequence, based on observed residues (ATOM records): (download) 
    >2z2mE (E:)
rtmdgkdvyttissplqsfmetqmdafqekvkgkymtatlvsaktgeilattqrptfdad
tkegitedfvwrdilyqsnyepgstmkvmmlaaaidnntfpggevfnsselkiadatird
wdvggrmmtfsqgfahssnvgmtlleqkmgdatwldylnrfkfgvptrfgltdeyagqlp
adnivniaqssfgqgisvtqtqmiraftaiandgvmlepkfisaiydpndqtarksqkei
vgnpvskdaasltrtnmvlvgtdpvygtmynhstgkptvtvpgqnvalksgtaqiadekn
ggylvgltdyifsavsmspaenpdfilyvtvqqpehysgiqlgefanpilerasamkdsl
nl

  • Chain 'F':
    Sequence; same for both SEQRES and ATOM records: (download) 
    >2z2mF (F:)
aleqvsqqspypmpsvkdispgdlaeelrrnlvqpivvgtgtkiknssaeegknlapnqq
vlilsdkaeevpdmygwtketaetlakwlnielefqgsgstvqkqdvrantaikdikkit
ltlgd