PDB entry 2z0d
View 2z0d on RCSB PDB site
Description: The crystal structure of human Atg4B- LC3(1-120) complex
Class: hydrolase/structural protein
Keywords: papain-like fold, ubiquitin fold, HYDROLASE/STRUCTURAL PROTEIN COMPLEX
Deposited on
2007-05-07, released
2007-05-22
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-10-06, with a file datestamp of
2009-10-02.
Experiment type: XRAY
Resolution: 1.9 Å
R-factor: 0.192
AEROSPACI score: 0.48
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Cysteine protease ATG4B
Species: Homo sapiens [TaxId:9606]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2z0da1 - Chain 'B':
Compound: Microtubule-associated proteins 1A/1B light chain 3B
Species: Rattus norvegicus [TaxId:10116]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2z0db_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2z0dA (A:)
gphmdaatltydtlrfaefedfpetsepvwilgrkysiftekdeilsdvasrlwftyrkn
fpaiggtgptsdtgwgcmlrcgqmifaqalvcrhlgrdwrwtqrkrqpdsyfsvlnafid
rkdsyysihqiaqmgvgegksigqwygpntvaqvlkklavfdtwsslavhiamdntvvme
eirrlcrtsvpcagatafpadsdrhcngfpagaevtnrpspwrplvlliplrlgltdine
ayvetlkhcfmmpqslgviggkpnsahyfigyvgeeliyldpattqpaveptdgcfipde
sfhcqhppcrmsiaeldpsiavgffckteddfndwcqqvkklsllggalpmfelveq
Sequence, based on observed residues (ATOM records): (download)
>2z0dA (A:)
tltydtlrfaefedfpetsepvwilgrkysiftekdeilsdvasrlwftyrknfpaiggt
gptsdtgwgcmlrcgqmifaqalvcrhlgrdwrwtqrkrqpdsyfsvlnafidrkdsyys
ihqiaqmgvgegksigqwygpntvaqvlkklavfdtwsslavhiamdntvvmeeirrlcr
tspwrplvlliplrlgltdineayvetlkhcfmmpqslgviggkpnsahyfigyvgeeli
yldpattqpavepipdesfhcqhppcrmsiaeldpsiavgffckteddfndwcqqvkkla
lpmfelveq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2z0dB (B:)
gplgsmpsektfkqrrsfeqrvedvrlireqhptkipviierykgekqlpvldktkflvp
dhvnmselikiirrrlqlnanqaffllvnghsmvsvstpisevyeserdedgflymvyas
qetfg
Sequence, based on observed residues (ATOM records): (download)
>2z0dB (B:)
ktfkqrrsfeqrvedvrlireqhptkipviierykgekqlpvldktkflvpdhvnmseli
kiirrrlqlnanqaffllvnghsmvsvstpisevyeserdedgflymvyasqetfg