PDB entry 2yxe

View 2yxe on RCSB PDB site
Description: Crystal structure of L-isoaspartyl protein carboxyl methyltranferase
Class: transferase
Keywords: Rossman-type fold, alpha/beta/alpha sandwich structure, Structural Genomics, NPPSFA, National Project on Protein Structural and Functional Analyses, RIKEN Structural Genomics/Proteomics Initiative, RSGI, TRANSFERASE
Deposited on 2007-04-26, released 2007-10-30
The last revision prior to the SCOPe 2.03 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 2 Å
R-factor: 0.194
AEROSPACI score: 0.43 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: protein-l-isoaspartate o-methyltransferase
    Species: METHANOCALDOCOCCUS JANNASCHII [TaxId:243232]
    Gene: pcm
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2yxea_
  • Chain 'B':
    Compound: protein-l-isoaspartate o-methyltransferase
    Species: METHANOCALDOCOCCUS JANNASCHII [TaxId:243232]
    Gene: pcm
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.03: d2yxeb_
  • Heterogens: ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2yxeA (A:)
mdleeqkkaviekliregyikskrvidallkvpreeflpehlkeyayvdtpleigygqti
saihmvgmmcelldlkpgmkvleigtgcgyhaavtaeivgedglvvsieripelaekaer
tlrklgydnvivivgdgtlgyeplapydriyttaagpkipeplirqlkdggkllmpvgry
lqrlvlaekrgdeiiikdcgpvafvplvgkegfqg

    Sequence, based on observed residues (ATOM records): (download) 
    >2yxeA (A:)
dleeqkkaviekliregyikskrvidallkvpreeflpehlkeyayvdtpleigygqtis
aihmvgmmcelldlkpgmkvleigtgcgyhaavtaeivgedglvvsieripelaekaert
lrklgydnvivivgdgtlgyeplapydriyttaagpkipeplirqlkdggkllmpvgryl
qrlvlaekrgdeiiikdcgpvafvplvgkegfqg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2yxeB (B:)
mdleeqkkaviekliregyikskrvidallkvpreeflpehlkeyayvdtpleigygqti
saihmvgmmcelldlkpgmkvleigtgcgyhaavtaeivgedglvvsieripelaekaer
tlrklgydnvivivgdgtlgyeplapydriyttaagpkipeplirqlkdggkllmpvgry
lqrlvlaekrgdeiiikdcgpvafvplvgkegfqg

    Sequence, based on observed residues (ATOM records): (download) 
    >2yxeB (B:)
dleeqkkaviekliregyikskrvidallkvpreeflpehlkeyayvdtpleigygqtis
aihmvgmmcelldlkpgmkvleigtgcgyhaavtaeivgedglvvsieripelaekaert
lrklgydnvivivgdgtlgyeplapydriyttaagpkipeplirqlkdggkllmpvgryl
qrlvlaekrgdeiiikdcgpvafvplvgkegfq