PDB entry 2ypv
View 2ypv on RCSB PDB site
Description: Crystal structure of the Meningococcal vaccine antigen factor H binding protein in complex with a bactericidal antibody
Class: immune system
Keywords: immune system, vaccine, monoclonal antibody, mab, epitope mapping
Deposited on
2012-11-01, released
2013-02-20
The last revision prior to the SCOPe 2.06 freeze date was dated
2013-03-20, with a file datestamp of
2013-03-15.
Experiment type: XRAY
Resolution: 1.8 Å
R-factor: 0.1834
AEROSPACI score: 0.52
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Lipoprotein
Species: Neisseria meningitidis MC58 [TaxId:122586]
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: fab 12c1
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
- Chain 'L':
Compound: fab 12c1
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2ypvl1, d2ypvl2 - Heterogens: EDO, HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'H':
No sequence available.
- Chain 'L':
Sequence, based on SEQRES records: (download)
>2ypvL (L:)
divltqspssiyaslgervtltckasqdihnylnwfqqkpgkspktliyranrlvdgvps
rfsgggsgqdysltisslefedigiyyclqydefpptfgggtrleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>2ypvL (L:)
divltqspssiyaslgervtltckasqdihnylnwfqqkpgkspktliyranrlvdgvps
rfsgggsgqdysltisslefedigiyyclqydefpptfgggtrleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrn