PDB entry 2yof
View 2yof on RCSB PDB site
Description: Plasmodium falciparum thymidylate kinase in complex with a (thio)urea- beta-deoxythymidine inhibitor
Class: transferase
Keywords: transferase, malaria
Deposited on
2012-10-24, released
2013-07-24
The last revision prior to the SCOPe 2.06 freeze date was dated
2013-07-24, with a file datestamp of
2013-07-19.
Experiment type: XRAY
Resolution: 1.82 Å
R-factor: 0.19067
AEROSPACI score: 0.51
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: thymidylate kinase
Species: PLASMODIUM FALCIPARUM [TaxId:36329]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2yofa_ - Chain 'B':
Compound: thymidylate kinase
Species: PLASMODIUM FALCIPARUM [TaxId:36329]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2yofb_ - Chain 'C':
Compound: thymidylate kinase
Species: PLASMODIUM FALCIPARUM [TaxId:36329]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2yofc_ - Heterogens: 74W, ACT, TAM, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2yofA (A:)
mtddkkkgkfivfegldrsgkstqskllveylknnnvevkhlyfpnretgigqiiskylk
mensmsnetihllfsanrwehmneikslllkgiwvvcdryaysgvayssgalnlnktwcm
npdqglikpdvvfylnvppnyaqnrsdygeeiyekvetqkkiyetykhfahedywinida
trkiedihndivkevtkikvepeefnflws
Sequence, based on observed residues (ATOM records): (download)
>2yofA (A:)
ddkkkgkfivfegldrsgkstqskllveylknnnvevkhlyfpnretgigqiiskylkme
nsmsnetihllfsanrwehmneikslllkgiwvvcdryaysgvayssgalnlnktwcmnp
dqglikpdvvfylnvppnyeeiyekvetqkkiyetykhfahedywinidatrkiedihnd
ivkevtkikvepeefnflws
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2yofB (B:)
mtddkkkgkfivfegldrsgkstqskllveylknnnvevkhlyfpnretgigqiiskylk
mensmsnetihllfsanrwehmneikslllkgiwvvcdryaysgvayssgalnlnktwcm
npdqglikpdvvfylnvppnyaqnrsdygeeiyekvetqkkiyetykhfahedywinida
trkiedihndivkevtkikvepeefnflws
Sequence, based on observed residues (ATOM records): (download)
>2yofB (B:)
mtddkkkgkfivfegldrsgkstqskllveylknnnvevkhlyfpnretgigqiiskylk
mensmsnetihllfsanrwehmneikslllkgiwvvcdryaysgvayssgalnlnktwcm
npdqglikpdvvfylnvppnyaqeeiyekvetqkkiyetykhfahedywinidatrkied
ihndivkevtkikvepeefnflws
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2yofC (C:)
mtddkkkgkfivfegldrsgkstqskllveylknnnvevkhlyfpnretgigqiiskylk
mensmsnetihllfsanrwehmneikslllkgiwvvcdryaysgvayssgalnlnktwcm
npdqglikpdvvfylnvppnyaqnrsdygeeiyekvetqkkiyetykhfahedywinida
trkiedihndivkevtkikvepeefnflws
Sequence, based on observed residues (ATOM records): (download)
>2yofC (C:)
ddkkkgkfivfegldrsgkstqskllveylknnnvevkhlyfpnretgigqiiskylkme
nsmsnetihllfsanrwehmneikslllkgiwvvcdryaysgvayssgalnlnktwcmnp
dqglikpdvvfylnvppnyaqnrsdygeeiyekvetqkkiyetykhfahedywinidatr
kiedihndivkevtkikvepeefnflws