PDB entry 2yht

View 2yht on RCSB PDB site
Description: Crystal structure of Hfq riboregulator from E. coli (P1 space group)
Class: chaperone
Keywords: chaperone, RNA chaperone
Deposited on 2011-05-06, released 2011-11-16
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-05-08, with a file datestamp of 2019-05-03.
Experiment type: XRAY
Resolution: 2.9 Å
R-factor: N/A
AEROSPACI score: 0.16 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yhta_
  • Chain 'B':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yhtb_
  • Chain 'C':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yhtc_
  • Chain 'D':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yhtd_
  • Chain 'E':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yhte_
  • Chain 'F':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yhtf_
  • Chain 'G':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yhtg_
  • Chain 'H':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yhth_
  • Chain 'I':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yhti_
  • Chain 'J':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yhtj_
  • Chain 'K':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yhtk_
  • Chain 'L':
    Compound: Protein hfq
    Species: Escherichia coli [TaxId:562]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yhtl_

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2yhtA (A:)
gamakgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykha
istvvpsrpvshhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2yhtA (A:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2yhtB (B:)
gamakgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykha
istvvpsrpvshhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2yhtB (B:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2yhtC (C:)
gamakgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykha
istvvpsrpvshhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2yhtC (C:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2yhtD (D:)
gamakgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykha
istvvpsrpvshhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2yhtD (D:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2yhtE (E:)
gamakgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykha
istvvpsrpvshhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2yhtE (E:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2yhtF (F:)
gamakgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykha
istvvpsrpvshhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2yhtF (F:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'G':
    Sequence, based on SEQRES records: (download) 
    >2yhtG (G:)
gamakgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykha
istvvpsrpvshhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2yhtG (G:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'H':
    Sequence, based on SEQRES records: (download) 
    >2yhtH (H:)
gamakgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykha
istvvpsrpvshhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2yhtH (H:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'I':
    Sequence, based on SEQRES records: (download) 
    >2yhtI (I:)
gamakgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykha
istvvpsrpvshhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2yhtI (I:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'J':
    Sequence, based on SEQRES records: (download) 
    >2yhtJ (J:)
gamakgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykha
istvvpsrpvshhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2yhtJ (J:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'K':
    Sequence, based on SEQRES records: (download) 
    >2yhtK (K:)
gamakgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykha
istvvpsrpvshhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2yhtK (K:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv

  • Chain 'L':
    Sequence, based on SEQRES records: (download) 
    >2yhtL (L:)
gamakgqslqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykha
istvvpsrpvshhs

    Sequence, based on observed residues (ATOM records): (download) 
    >2yhtL (L:)
slqdpflnalrrervpvsiylvngiklqgqiesfdqfvillkntvsqmvykhaistvvps
rpv