PDB entry 2yc4

View 2yc4 on RCSB PDB site
Description: intraflagellar transport complex 25-27 from chlamydomonas
Class: transport protein
Keywords: transport protein, cilium, ift complex
Deposited on 2011-03-11, released 2011-03-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-06-01, with a file datestamp of 2011-05-27.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.2298
AEROSPACI score: 0.2 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: intraflagellar transport protein 25
    Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yc4a_
  • Chain 'B':
    Compound: intraflagellar transport protein 25
    Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yc4b_
  • Chain 'C':
    Compound: small rab-related gtpase
    Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yc4c_
  • Chain 'D':
    Compound: small rab-related gtpase
    Species: CHLAMYDOMONAS REINHARDTII [TaxId:3055]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2yc4d_
  • Heterogens: CA, MG, CL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2yc4A (A:)
gaasmkdyareengglvvmascsderfppenmldgkdntfwvttgmfpqefvlrlescir
vskittlslnvrklavekcdqdkpdqfekvfevelanrgdrlqtevhqvnirakylkfil
lqghgefatvnrvsvvggd

    Sequence, based on observed residues (ATOM records): (download) 
    >2yc4A (A:)
mkdyareengglvvmascsderfppenmldgkdntfwvttgmfpqefvlrlescirvski
ttlslnvrklavekcdqdkpdqfekvfevelanlqtevhqvnirakylkfillqghgefa
tvnrvsvvggd

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2yc4B (B:)
gaasmkdyareengglvvmascsderfppenmldgkdntfwvttgmfpqefvlrlescir
vskittlslnvrklavekcdqdkpdqfekvfevelanrgdrlqtevhqvnirakylkfil
lqghgefatvnrvsvvggd

    Sequence, based on observed residues (ATOM records): (download) 
    >2yc4B (B:)
kdyareengglvvmascsderfppenmldgkdntfwvttgmfpqefvlrlescirvskit
tlslnvrklavekcdqdkpdqfekvfevelanrglqtevhqvnirakylkfillqghgef
atvnrvsvvgg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2yc4C (C:)
gaasmvkkevkpiditatlrckvavvgeatvgksalismftskgskflkdyamtsgvevv
vapvtipdttvsvelflldtagsdlykeqisqywngvyyailvfdvssmesfesckawfe
llksarpdrerplravlvanktdlppqrhqvrldmaqdwattntldffdvsanppgkdad
apflsiattfyrnyedkvaafqdacrny

    Sequence, based on observed residues (ATOM records): (download) 
    >2yc4C (C:)
kpiditatlrckvavvgeatvgksalismftsvvapvtipdttvsvelflldtagsdlyk
eqisqywngvyyailvfdvssmesfesckawfellksarpdrerplravlvankppqrhq
vrldmaqdwattntldffdvsnppgkdadapflsiattfyrnyedkvaafqdacrny

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2yc4D (D:)
gaasmvkkevkpiditatlrckvavvgeatvgksalismftskgskflkdyamtsgvevv
vapvtipdttvsvelflldtagsdlykeqisqywngvyyailvfdvssmesfesckawfe
llksarpdrerplravlvanktdlppqrhqvrldmaqdwattntldffdvsanppgkdad
apflsiattfyrnyedkvaafqdacrny

    Sequence, based on observed residues (ATOM records): (download) 
    >2yc4D (D:)
piditatlrckvavvgeatvgksalismftskgsvapvtipdttvsvelflldtsdlyke
qisqywngvyyailvfdvssmesfesckawfellksarpdrerplravlvanktdlpqvr
ldmaqdwattntldffdvsanppgkdadapflsiattfyrnyedkvaafqdacrn