PDB entry 2y8a
View 2y8a on RCSB PDB site
Description: vim-7 with oxidised. structural and computational investigations of vim-7: insights into the substrate specificity of vim metallo-beta-lactamases
Class: hydrolase
Keywords: hydrolase, cephalosporins, antibiotic recognition
Deposited on
2011-02-03, released
2011-06-15
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-08-31, with a file datestamp of
2011-08-26.
Experiment type: XRAY
Resolution: 2.33 Å
R-factor: 0.19338
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: metallo-b-lactamase
Species: Pseudomonas aeruginosa [TaxId:287]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2y8aa_ - Heterogens: ZN, MG, UNX, HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2y8aA (A:)
mfqirsflvgisafvmavlgsaaysaqpggeyptvddipvgevrlykigdgvwshiatqk
lgdtvyssnglivrdadelllidtawgakntvallaeiekqiglpvtrsisthfhddrvg
gvdvlraagvatytspltrqlaeaagnevpahslkalsssgdvvrfgpvevfypgaahsg
dnlvvyvpavrvlfggcavheasresagnvadanlaewpatikriqqrypeaevvipghg
lpgglellqhttnvvkthkvrpvae
Sequence, based on observed residues (ATOM records): (download)
>2y8aA (A:)
eyptvddipvgevrlykigdgvwshiatqklgdtvyssnglivrdadelllidtawgakn
tvallaeiekqiglpvtrsisthfhddrvggvdvlraagvatytspltrqlaeaagnevp
ahslkalsssgdvvrfgpvevfypgaahsgdnlvvyvpavrvlfggcavheasresagnv
adanlaewpatikriqqrypeaevvipghglpgglellqhttnvvk