PDB entry 2xqy

View 2xqy on RCSB PDB site
Description: crystal structure of pseudorabies core fragment of glycoprotein h in complex with fab d6.3
Class: immune system/viral protein
Keywords: immune system-viral protein complex, envelope protein
Deposited on 2010-09-08, released 2010-12-22
The last revision prior to the SCOPe 2.06 freeze date was dated 2011-04-06, with a file datestamp of 2011-04-01.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.1887
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Envelope glycoprotein H
    Species: SUID HERPESVIRUS [TaxId:10345]
    Database cross-references and differences (RAF-indexed):
  • Chain 'E':
    Compound: Envelope glycoprotein H
    Species: SUID HERPESVIRUS [TaxId:10345]
    Database cross-references and differences (RAF-indexed):
  • Chain 'G':
    Compound: a13-d6.3 monoclonal antibody
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2XQY
  • Chain 'J':
    Compound: a13-d6.3 monoclonal antibody
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2XQY
  • Chain 'K':
    Compound: a13-d6.3 monoclonal antibody
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2XQY (Start-219)
    Domains in SCOPe 2.06: d2xqyk1, d2xqyk2
  • Chain 'L':
    Compound: a13-d6.3 monoclonal antibody
    Species: Mus musculus [TaxId:10090]
    Database cross-references and differences (RAF-indexed):
    • PDB 2XQY (Start-219)
    Domains in SCOPe 2.06: d2xqyl1, d2xqyl2
  • Heterogens: NAG, HOH

PDB Chain Sequences:

  • Chain 'A':
    No sequence available.

  • Chain 'E':
    No sequence available.

  • Chain 'G':
    No sequence available.

  • Chain 'J':
    No sequence available.

  • Chain 'K':
    Sequence, based on SEQRES records: (download)
    >2xqyK (K:)
    rsdivltqspaslalslgqratiscrasksvstsgysymywyqqkpgqppklliylasnl
    esgvparfsgsgsgtdftlnihpveeedaatyycqhsrelpwtfgggtkleinradaapt
    vsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstys
    msstltltkdeyerhnsytceathktstspivksfnrnec
    

    Sequence, based on observed residues (ATOM records): (download)
    >2xqyK (K:)
    divltqspaslalslgqratiscrasksvstsgysymywyqqkpgqppklliylasnles
    gvparfsgsgsgtdftlnihpveeedaatyycqhsrelpwtfgggtkleinradaaptvs
    ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
    stltltkdeyerhnsytceathktstspivksfnrnec
    

  • Chain 'L':
    Sequence, based on SEQRES records: (download)
    >2xqyL (L:)
    rsdivltqspaslalslgqratiscrasksvstsgysymywyqqkpgqppklliylasnl
    esgvparfsgsgsgtdftlnihpveeedaatyycqhsrelpwtfgggtkleinradaapt
    vsifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstys
    msstltltkdeyerhnsytceathktstspivksfnrnec
    

    Sequence, based on observed residues (ATOM records): (download)
    >2xqyL (L:)
    divltqspaslalslgqratiscrasksvstsgysymywyqqkpgqppklliylasnles
    gvparfsgsgsgtdftlnihpveeedaatyycqhsrelpwtfgggtkleinradaaptvs
    ifppsseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysms
    stltltkdeyerhnsytceathktstspivksfnrnec