PDB entry 2xgp

View 2xgp on RCSB PDB site
Description: Yeast DNA polymerase eta in complex with C8-2-acetylaminofluorene containing DNA
Class: transferase/DNA
Keywords: transferase-DNA complex, translesion DNA synthesis, DNA-binding, DNA damage
Deposited on 2010-06-07, released 2010-11-03
The last revision prior to the SCOPe 2.08 freeze date was dated 2017-12-06, with a file datestamp of 2017-12-01.
Experiment type: XRAY
Resolution: 2.7 Å
R-factor: N/A
AEROSPACI score: 0.18 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: DNA Polymerase ETA
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q04049 (23-End)
      • expression tag (22)
    Domains in SCOPe 2.08: d2xgpa1, d2xgpa2, d2xgpa3
  • Chain 'B':
    Compound: DNA Polymerase ETA
    Species: Saccharomyces cerevisiae [TaxId:4932]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q04049 (23-End)
      • expression tag (21-22)
    Domains in SCOPe 2.08: d2xgpb1, d2xgpb2, d2xgpb3
  • Chain 'P':
    Compound: 5'-d(*gp*tp*gp*gp*ap*tp*gp*ap*g)-3'
  • Chain 'Q':
    Compound: 5'-d(*gp*tp*gp*gp*ap*tp*gp*ap*g)-3'
  • Chain 'T':
    Compound: 5'-d(*cp*8fg*cp*tp*cp*ap*tp*cp*cp*ap*c)-3'
  • Chain 'U':
    Compound: 5'-d(*cp*8fg*cp*tp*cp*ap*tp*cp*cp*ap*c)-3'
  • Heterogens: CA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2xgpA (A:)
maswshpqfekgastslykkagrmskftwkeliqlgspskayesslaciahidmnaffaq
veqmrcglskedpvvcvqwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkk
gedfwqyhdgcgswvqdpakqisvedhkvslepyrresrkalkifksacdlverasidev
fldlgricfnmlmfdneyeltgdlklkdalsnireafiggnydinshlplipekikslkf
egdvfnpegrdlitdwddvilalgsqvckgirdsikdilgyttscglsstknvcklasny
kkpdaqtivkndclldfldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpd
nagqlkefldakvkqsdydrstsnidplktadlaeklfklsrgryglplssrpvvksmms
nknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislktksyevyrk
sgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdiidlqk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xgpA (A:)
rmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqwnsi
iavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakqi
svedhkvslepyrresrkalkifksacdlverasidevfldlgricfnmlmfdneyeltg
dlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvila
lgsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcgk
feitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydrst
snidplktadlaeklfklsrgryglplssrpvvksmmsnknlrgkscnsivdciswlevf
caeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshellkvgik
fvtdldikgknksyypltklsmtitnfdiid

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2xgpB (B:)
maswshpqfekgastslykkagrmskftwkeliqlgspskayesslaciahidmnaffaq
veqmrcglskedpvvcvqwnsiiavsyaarkygisrmdtiqealkkcsnlipihtavfkk
gedfwqyhdgcgswvqdpakqisvedhkvslepyrresrkalkifksacdlverasidev
fldlgricfnmlmfdneyeltgdlklkdalsnireafiggnydinshlplipekikslkf
egdvfnpegrdlitdwddvilalgsqvckgirdsikdilgyttscglsstknvcklasny
kkpdaqtivkndclldfldcgkfeitsfwtlggvlgkelidvldlphensikhiretwpd
nagqlkefldakvkqsdydrstsnidplktadlaeklfklsrgryglplssrpvvksmms
nknlrgkscnsivdciswlevfcaeltsriqdleqeynkiviprtvsislktksyevyrk
sgpvaykginfqshellkvgikfvtdldikgknksyypltklsmtitnfdiidlqk

    Sequence, based on observed residues (ATOM records): (download) 
    >2xgpB (B:)
grmskftwkeliqlgspskayesslaciahidmnaffaqveqmrcglskedpvvcvqwns
iiavsyaarkygisrmdtiqealkkcsnlipihtavfkkgedfwqyhdgcgswvqdpakq
isvedhkvslepyrresrkalkifksacdlverasidevfldlgricfnmlmfdneyelt
gdlklkdalsnireafiggnydinshlplipekikslkfegdvfnpegrdlitdwddvil
algsqvckgirdsikdilgyttscglsstknvcklasnykkpdaqtivkndclldfldcg
kfeitsfwtlggvlgkelidvldlphensikhiretwpdnagqlkefldakvkqsdydrs
tsnidplktadlaeklfklsrgryglplssrpvvksmmsnknlrgkscnsivdciswlev
fcaeltsriqdleqeynkiviprtvsislktksyevyrksgpvaykginfqshellkvgi
kfvtdldikgknksyypltklsmtitnfdiid

  • Chain 'P':
    No sequence available.

  • Chain 'Q':
    No sequence available.

  • Chain 'T':
    No sequence available.

  • Chain 'U':
    No sequence available.