PDB entry 2wmf

View 2wmf on RCSB PDB site
Description: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae tigr4 (sp4gh98) in its native form.
Class: hydrolase
Keywords: hydrolase, glycoside hydrolase, streptococcus pneumoniae, blood group antigen, fucose utilization
Deposited on 2009-06-30, released 2009-07-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-09-22, with a file datestamp of 2009-09-18.
Experiment type: XRAY
Resolution: 1.5 Å
R-factor: 0.12571
AEROSPACI score: 0.68 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: fucolectin-related protein
    Species: STREPTOCOCCUS PNEUMONIAE [TaxId:170187]
    Database cross-references and differences (RAF-indexed):
    • PDB 2WMF
      • conflict (535)
    • Uniprot Q97N96 (Start-580)
    Domains in SCOPe 2.08: d2wmfa1, d2wmfa2
  • Heterogens: HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2wmfA (A:)
mgsshhhhhhssglvprgshmaadnrvqmrttinnesplllsplygndngnglwwgntlk
gaweaipedvkpyaaielhpakvckptsciprdtkelrewyvkmleeaqslnipvflvim
sagerntvppewldeqfqkysvlkgvlnienywiynnqlaphsakylevcakygahfiwh
dhekwfwetimndptffeasqkyhknlvlatkntpirddagtdsivsgfwlsglcdnwgs
stdtwkwwekhytntfetgrardmrsyasepesmiamemmnvytgggtvynfecaaytfm
tndvptpaftkgiipffrhaiqnpapskeevvnrtkavfwngegrisslngfyqglysnd
etmplynngryhilpvihekidkekissifpnakiltknseelsskvnylnslypklyeg
dgyaqrvgnswyiynsnaninknqqvmlpmytnntkslsldltphtyavvkenpnnlhil
lnnyrtdktamwalsgnfdaskswkkeelelanwisknysinpvdndfrtttltlsghtg
hkpqinisgdknhytytenwdenthvytitvnhngmvemsi

    Sequence, based on observed residues (ATOM records): (download) 
    >2wmfA (A:)
vqmrttinnesplllsplygndngnglwwgntlkgaweaipedvkpyaaielhpakvckp
tsciprdtkelrewyvkmleeaqslnipvflvimsagerntvppewldeqfqkysvlkgv
lnienywiynnqlaphsakylevcakygahfiwhdhekwfwetimndptffeasqkyhkn
lvlatkntpirddagtdsivsgfwlsglcdnwgsstdtwkwwekhytntfetgrardmrs
yasepesmiamemmnvytgggtvynfecaaytfmtndvptpaftkgiipffrhaiqnpap
skeevvnrtkavfwngegrisslngfyqglysndetmplynngryhilpvihekidkeki
ssifpnakiltknseelsskvnylnslypklyegdgyaqrvgnswyiynsnaninknqqv
mlpmytnntkslsldltphtyavvkenpnnlhillnnyrtdktamwalsgnfdaskswkk
eelelanwisknysinpvdndfrtttltlsghtghkpqinisgdknhytytenwdenthv
ytitvnhngmvemsi