PDB entry 2wkb

View 2wkb on RCSB PDB site
Description: crystal structure of macrophage migration inhibitory factor from plasmodium berghei
Class: cytokine
Keywords: cytokine
Deposited on 2009-06-08, released 2009-10-27
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-06-15, with a file datestamp of 2011-06-10.
Experiment type: XRAY
Resolution: 1.78 Å
R-factor: 0.2019
AEROSPACI score: 0.49 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: macrophage migration inhibitory factor
    Species: PLASMODIUM BERGHEI [TaxId:5823]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4YQW0 (0-114)
      • expression tag (115)
    Domains in SCOPe 2.08: d2wkba1, d2wkba2
  • Chain 'B':
    Compound: macrophage migration inhibitory factor
    Species: PLASMODIUM BERGHEI [TaxId:5823]
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2wkbb_
  • Chain 'C':
    Compound: macrophage migration inhibitory factor
    Species: PLASMODIUM BERGHEI [TaxId:5823]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4YQW0 (0-114)
      • expression tag (115)
    Domains in SCOPe 2.08: d2wkbc1, d2wkbc2
  • Chain 'D':
    Compound: macrophage migration inhibitory factor
    Species: PLASMODIUM BERGHEI [TaxId:5823]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4YQW0 (0-114)
      • expression tag (115)
    Domains in SCOPe 2.08: d2wkbd1, d2wkbd2
  • Chain 'E':
    Compound: macrophage migration inhibitory factor
    Species: PLASMODIUM BERGHEI [TaxId:5823]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4YQW0 (0-114)
      • expression tag (115-116)
    Domains in SCOPe 2.08: d2wkbe1, d2wkbe2
  • Chain 'F':
    Compound: macrophage migration inhibitory factor
    Species: PLASMODIUM BERGHEI [TaxId:5823]
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q4YQW0 (0-114)
      • expression tag (115)
    Domains in SCOPe 2.08: d2wkbf1, d2wkbf2
  • Heterogens: GOL, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2wkbA (A:)
pccelitnisipddkaqntlseiedaisnilgkpvayimsnydyqknlrfsgsnegycfv
rltsigginrsnnslladkitkilsnhlsvkprrvyiefrdcsaqnfafsgslfggsrsh
hhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2wkbA (A:)
pccelitnisipddkaqntlseiedaisnilgkpvayimsnydyqknlrfsgsnegycfv
rltsisnnslladkitkilsnhlsvkprrvyiefrdnfafsgslfgg

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2wkbB (B:)
pccelitnisipddkaqntlseiedaisnilgkpvayimsnydyqknlrfsgsnegycfv
rltsigginrsnnslladkitkilsnhlsvkprrvyiefrdcsaqnfafsgslfggsrsh
hhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2wkbB (B:)
pccelitnisipddkaqntlseiedaisnilgkpvayimsnydyqknlrfsgsnegycfv
rltsigginrsnnslladkitkilsnhlsvkprrvyiefrdcnfafsgslfg

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2wkbC (C:)
pccelitnisipddkaqntlseiedaisnilgkpvayimsnydyqknlrfsgsnegycfv
rltsigginrsnnslladkitkilsnhlsvkprrvyiefrdcsaqnfafsgslfggsrsh
hhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2wkbC (C:)
pccelitnisipddkaqntlseiedaisnilgkpvayimsnydyqknlrfsgsnegycfv
rltsigginrsnnslladkitkilsnhlsvkprrvyiefrdcsaqnfafsgslfgg

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2wkbD (D:)
pccelitnisipddkaqntlseiedaisnilgkpvayimsnydyqknlrfsgsnegycfv
rltsigginrsnnslladkitkilsnhlsvkprrvyiefrdcsaqnfafsgslfggsrsh
hhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2wkbD (D:)
pccelitnisipddkaqntlseiedaisnilgkpvayimsnydyqknlrfsgsnegycfv
rltsigginrsnnslladkitkilsnhlsvkprrvyiefrdcfafsgslfgg

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2wkbE (E:)
pccelitnisipddkaqntlseiedaisnilgkpvayimsnydyqknlrfsgsnegycfv
rltsigginrsnnslladkitkilsnhlsvkprrvyiefrdcsaqnfafsgslfggsrsh
hhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2wkbE (E:)
pccelitnisipddkaqntlseiedaisnilgkpvayimsnydyqknlrfsgsnegycfv
rltsigginrsnnslladkitkilsnhlsvkprrvyiefrdcsaqnfafsgslfggs

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2wkbF (F:)
pccelitnisipddkaqntlseiedaisnilgkpvayimsnydyqknlrfsgsnegycfv
rltsigginrsnnslladkitkilsnhlsvkprrvyiefrdcsaqnfafsgslfggsrsh
hhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2wkbF (F:)
pccelitnisipddkaqntlseiedaisnilgkpvayimsnydyqknlrfsgsnegycfv
rltsigginrsnnslladkitkilsnhlsvkprrvyiefrdcsaqnfafsgslfgg