PDB entry 2vzu

View 2vzu on RCSB PDB site
Description: complex of amycolatopsis orientalis exo-chitosanase csxa d469a with pnp-beta-d-glucosamine
Class: hydrolase
Keywords: gh2, csxa, pnp-glucosamine, glycoside hydrolase, exo-beta-d-glucosaminidase, hydrolase
Deposited on 2008-08-05, released 2008-10-14
The last revision prior to the SCOPe 2.06 freeze date was dated 2009-09-29, with a file datestamp of 2009-09-25.
Experiment type: XRAY
Resolution: 2.1 Å
R-factor: 0.174
AEROSPACI score: 0.42 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: exo-beta-d-glucosaminidase
    Species: AMYCOLATOPSIS ORIENTALIS [TaxId:31958]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VZU
      • engineered mutation (468)
      • conflict (749)
    • Uniprot Q56F26
    Domains in SCOPe 2.06: d2vzua1, d2vzua2, d2vzua3, d2vzua4, d2vzua5
  • Chain 'B':
    Compound: exo-beta-d-glucosaminidase
    Species: AMYCOLATOPSIS ORIENTALIS [TaxId:31958]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VZU
      • engineered mutation (468)
      • conflict (749)
    • Uniprot Q56F26
    Domains in SCOPe 2.06: d2vzub1, d2vzub2, d2vzub3, d2vzub4, d2vzub5
  • Heterogens: CD, PNJ, ACT, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download)
    >2vzuA (A:)
    vsfrqkrtripllamtvtalaaavcgvttapaatgaevavplsvgaaagnatpipgyviq
    ssaqvsddsavskpgfptsgwypvssrstvyagllqngkyadpfystnmqnvpaaqfsvp
    wwyrtdlnvddtssrtyldfsgvlskadvwvngtkvatkdqvngaytrhdlditaqvhtg
    vnsvafkvypndpnrdlsmgwidwaqtppdqnmgivrdvlvrrsgavalrsahviqklns
    aldhadltvkadvrndsanavqttvagtvagkpisqtvslaakerktvtfplvgldrpnv
    wwpagmggqhrydldltasvggtpsdaakskfgvrdvkatlnssggrqysvngkpllirg
    ggytpdlflrwnetaaadklkyvlnlglntvrleghiepdeffdiaddlgvltmpgwecc
    dkwegqvngeekgepwvesdypiakasmfseaerlrdhpsvisfhigsafapdrrieqgy
    ldamkaadfllpvipaasarpspitgasgmkmngpydyvppvywydksqkdrggawsfns
    etsagvdiptmdtlkrmmsaseldtmwknpsakqyhrsssdtfgnlklfgdaltkrygas
    anlndfvrkaqlsqyenvraefeshsrnytdstnpstgliywmlnspwtslhwqlfdaym
    dqngayygakkaneplhiqyshdnrsvvvinqtsnavsgltattklynldgtekysntkt
    glsvgalgakatavtvpavsglsttylaknvltdssgkevsrnvywlstkadtlnwggsd
    wyytpqsafadlsglnnlgqsavgatansvagadgtttttvtlkntsggrlpafyvdskv
    vdsagkpvlpvewnanavslwpgetttltakyrtadlkgskpsvrisgwntgtqtvpadg
    sgpgpsdpvdyqaedativqgavesnhagytgtgfvnydnvagssvewtvtvpsagtydv
    vvryangtttsrpldfsvngsisasgvafgstgtwpawttktvrvtlaagvnkikavatt
    anggpnvdkitl
    

    Sequence, based on observed residues (ATOM records): (download)
    >2vzuA (A:)
    gnatpipgyviqssaqvsddsavskpgfptsgwypvssrstvyagllqngkyadpfystn
    mqnvpaaqfsvpwwyrtdlnvddtssrtyldfsgvlskadvwvngtkvatkdqvngaytr
    hdlditaqvhtgvnsvafkvypndpnrdlsmgwidwaqtppdqnmgivrdvlvrrsgava
    lrsahviqklnsaldhadltvkadvrndsanavqttvagtvagkpisqtvslaakerktv
    tfplvgldrpnvwwpagmggqhrydldltasvggtpsdaakskfgvrdvkatlnssggrq
    ysvngkpllirgggytpdlflrwnetaaadklkyvlnlglntvrleghiepdeffdiadd
    lgvltmpgweccdkwegqvngeekgepwvesdypiakasmfseaerlrdhpsvisfhigs
    afapdrrieqgyldamkaadfllpvipaasarpspitgasgmkmngpydyvppvywydks
    qkdrggawsfnsetsagvdiptmdtlkrmmsaseldtmwknpsakqyhrsssdtfgnlkl
    fgdaltkrygasanlndfvrkaqlsqyenvraefeshsrnytdstnpstgliywmlnspw
    tslhwqlfdaymdqngayygakkaneplhiqyshdnrsvvvinqtsnavsgltattklyn
    ldgtekysntktglsvgalgakatavtvpavsglsttylaknvltdssgkevsrnvywls
    tkadtlnwggsdwyytpqsafadlsglnnlgqsavgatansvagadgtttttvtlkntsg
    grlpafyvdskvvdsagkpvlpvewnanavslwpgetttltakyrtadlkgskpsvrisg
    wntgtqtvpad
    

  • Chain 'B':
    Sequence, based on SEQRES records: (download)
    >2vzuB (B:)
    vsfrqkrtripllamtvtalaaavcgvttapaatgaevavplsvgaaagnatpipgyviq
    ssaqvsddsavskpgfptsgwypvssrstvyagllqngkyadpfystnmqnvpaaqfsvp
    wwyrtdlnvddtssrtyldfsgvlskadvwvngtkvatkdqvngaytrhdlditaqvhtg
    vnsvafkvypndpnrdlsmgwidwaqtppdqnmgivrdvlvrrsgavalrsahviqklns
    aldhadltvkadvrndsanavqttvagtvagkpisqtvslaakerktvtfplvgldrpnv
    wwpagmggqhrydldltasvggtpsdaakskfgvrdvkatlnssggrqysvngkpllirg
    ggytpdlflrwnetaaadklkyvlnlglntvrleghiepdeffdiaddlgvltmpgwecc
    dkwegqvngeekgepwvesdypiakasmfseaerlrdhpsvisfhigsafapdrrieqgy
    ldamkaadfllpvipaasarpspitgasgmkmngpydyvppvywydksqkdrggawsfns
    etsagvdiptmdtlkrmmsaseldtmwknpsakqyhrsssdtfgnlklfgdaltkrygas
    anlndfvrkaqlsqyenvraefeshsrnytdstnpstgliywmlnspwtslhwqlfdaym
    dqngayygakkaneplhiqyshdnrsvvvinqtsnavsgltattklynldgtekysntkt
    glsvgalgakatavtvpavsglsttylaknvltdssgkevsrnvywlstkadtlnwggsd
    wyytpqsafadlsglnnlgqsavgatansvagadgtttttvtlkntsggrlpafyvdskv
    vdsagkpvlpvewnanavslwpgetttltakyrtadlkgskpsvrisgwntgtqtvpadg
    sgpgpsdpvdyqaedativqgavesnhagytgtgfvnydnvagssvewtvtvpsagtydv
    vvryangtttsrpldfsvngsisasgvafgstgtwpawttktvrvtlaagvnkikavatt
    anggpnvdkitl
    

    Sequence, based on observed residues (ATOM records): (download)
    >2vzuB (B:)
    gnatpipgyviqssaqvsddsavskpgfptsgwypvssrstvyagllqngkyadpfystn
    mqnvpaaqfsvpwwyrtdlnvddtssrtyldfsgvlskadvwvngtkvatkdqvngaytr
    hdlditaqvhtgvnsvafkvypndpnrdlsmgwidwaqtppdqnmgivrdvlvrrsgava
    lrsahviqklnsaldhadltvkadvrndsanavqttvagtvagkpisqtvslaakerktv
    tfplvgldrpnvwwpagmggqhrydldltasvggtpsdaakskfgvrdvkatlnssggrq
    ysvngkpllirgggytpdlflrwnetaaadklkyvlnlglntvrleghiepdeffdiadd
    lgvltmpgweccdkwegqvngeekgepwvesdypiakasmfseaerlrdhpsvisfhigs
    afapdrrieqgyldamkaadfllpvipaasarpspitgasgmkmngpydyvppvywydks
    qkdrggawsfnsetsagvdiptmdtlkrmmsaseldtmwknpsakqyhrsssdtfgnlkl
    fgdaltkrygasanlndfvrkaqlsqyenvraefeshsrnytdstnpstgliywmlnspw
    tslhwqlfdaymdqngayygakkaneplhiqyshdnrsvvvinqtsnavsgltattklyn
    ldgtekysntktglsvgalgakatavtvpavsglsttylaknvltdssgkevsrnvywls
    tkadtlnwggsdwyytpqsafadlsglnnlgqsavgatansvagadgtttttvtlkntsg
    grlpafyvdskvvdsagkpvlpvewnanavslwpgetttltakyrtadlkgskpsvrisg
    wntgtqtvpad