PDB entry 2vmj

View 2vmj on RCSB PDB site
Description: type 1 copper-binding loop of nitrite reductase mutant: 130-capegmvpwhvvsgm-144 to 130-ctphpfm-136
Class: oxidoreductase
Keywords: cupredoxin, type 1 copper, type 2 copper, electron transfer, loop-directed mutagenesis, copper-containing nitrite reductase, oxidoreductase
Deposited on 2008-01-28, released 2008-12-23
The last revision prior to the SCOPe 2.08 freeze date was dated 2008-12-23, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.5 Å
R-factor: 0.184
AEROSPACI score: 0.33 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: dissimilatory copper-containing nitrite reductase
    Species: ALCALIGENES XYLOSOXYDANS XYLOSOXYDANS [TaxId:85698]
    Database cross-references and differences (RAF-indexed):
    • PDB 2VMJ (131-135)
    • Uniprot O68601 (136-End)
    Domains in SCOPe 2.08: d2vmja1, d2vmja2
  • Heterogens: ZN, EPE, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2vmjA (A:)
mqdadklphtkvtlvappqvhpheqatksgpkvveftmtieekkmviddkgttlqamtfn
gsmpgptlvvhegdyvqltlvnpatnamphnvdfhgatgalggakltnvnpgeqatlrfk
adrsgtfvyhctphpfmsgtlmvlprdglkdpqgkplhydraytigefdlyipkgpdgky
kdyatlaesygdtvqvmrtltpshivfngkvgaltganaltakvgetvllihsqanrdtr
phligghgdwvwetgkfanppqrdletwfirggsagaalytfkqpgvyaylnhnlieafe
lgaaghikvegkwnddlmkqikapapipr

    Sequence, based on observed residues (ATOM records): (download) 
    >2vmjA (A:)
dadklphtkvtlvappqvhpheqatksgpkvveftmtieekkmviddkgttlqamtfngs
mpgptlvvhegdyvqltlvnpatnamphnvdfhgatgalggakltnvnpgeqatlrfkad
rsgtfvyhctphpfmsgtlmvlprdglkdpqgkplhydraytigefdlyipkgpdgkykd
yatlaesygdtvqvmrtltpshivfngkvgaltganaltakvgetvllihsqanrdtrph
ligghgdwvwetgkfanppqrdletwfirggsagaalytfkqpgvyaylnhnlieafelg
aaghikvegkwnddlmkqikapapip