PDB entry 2vj1

View 2vj1 on RCSB PDB site
Description: A Structural View of the Inactivation of the SARS-Coronavirus Main Proteinase by Benzotriazole Esters
Class: hydrolase
Keywords: sars, protease, hydrolase, polyprotein, thiol protease, ribosomal frameshift, sars coronavirus main proteinase
Deposited on 2007-12-06, released 2008-07-01
The last revision prior to the SCOPe 2.08 freeze date was dated 2019-07-24, with a file datestamp of 2019-07-19.
Experiment type: XRAY
Resolution: 2.25 Å
R-factor: N/A
AEROSPACI score: 0.25 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: sars coronavirus main proteinase
    Species: HUMAN SARS CORONAVIRUS [TaxId:227859]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A7J8L3 (0-End)
    • PDB 2VJ1
    Domains in SCOPe 2.08: d2vj1a_
  • Chain 'B':
    Compound: sars coronavirus main proteinase
    Species: HUMAN SARS CORONAVIRUS [TaxId:227859]
    Database cross-references and differences (RAF-indexed):
    • Uniprot A7J8L3 (0-End)
    • PDB 2VJ1
    Domains in SCOPe 2.08: d2vj1b_
  • Heterogens: DMS, BEZ, XP1, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2vj1A (A:)
gfrkmafpsgkvegcmvqvtcgtttlnglwlddtvycprhvictaedmlnpnyedllirk
snhsflvqagnvqlrvighsmqncllrlkvdtsnpktpkykfvriqpgqtfsvlacyngs
psgvyqcamrpnhtikgsflngscgsvgfnidydcvsfcymhhmelptgvhagtdlegkf
ygpfvdrqtaqaagtdttitlnvlawlyaavingdrwflnrftttlndfnlvamkynyep
ltqdhvdilgplsaqtgiavldmcaalkellqngmngrtilgstiledeftpfdvvrqcs
gvthhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2vj1A (A:)
gfrkmafpsgkvegcmvqvtcgtttlnglwlddtvycprhvictaedmlnpnyedllirk
snhsflvqagnvqlrvighsmqncllrlkvdtsnpktpkykfvriqpgqtfsvlacyngs
psgvyqcamrpnhtikgsflngscgsvgfnidydcvsfcymhhmelptgvhagtdlegkf
ygpfvdrqtaqaagtdttitlnvlawlyaavingdrwflnrftttlndfnlvamkynyep
ltqdhvdilgplsaqtgiavldmcaalkellqngmngrtilgstiledeftpfdvvrqcs

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2vj1B (B:)
gfrkmafpsgkvegcmvqvtcgtttlnglwlddtvycprhvictaedmlnpnyedllirk
snhsflvqagnvqlrvighsmqncllrlkvdtsnpktpkykfvriqpgqtfsvlacyngs
psgvyqcamrpnhtikgsflngscgsvgfnidydcvsfcymhhmelptgvhagtdlegkf
ygpfvdrqtaqaagtdttitlnvlawlyaavingdrwflnrftttlndfnlvamkynyep
ltqdhvdilgplsaqtgiavldmcaalkellqngmngrtilgstiledeftpfdvvrqcs
gvthhhhhh

    Sequence, based on observed residues (ATOM records): (download) 
    >2vj1B (B:)
gfrkmafpsgkvegcmvqvtcgtttlnglwlddtvycprhvictaedmlnpnyedllirk
snhsflvqagnvqlrvighsmqncllrlkvdtsnpktpkykfvriqpgqtfsvlacyngs
psgvyqcamrpnhtikgsflngscgsvgfnidydcvsfcymhhmelptgvhagtdlegkf
ygpfvdrqtaqaagtdttitlnvlawlyaavingdrwflnrftttlndfnlvamkynyep
ltqdhvdilgplsaqtgiavldmcaalkellqngmngrtilgstiledeftpfdvvrqcs