PDB entry 2v7h
View 2v7h on RCSB PDB site
Description: crystal structure of an immunogen specific anti-mannopyranoside monoclonal antibody fab fragment
Class: immune system
Keywords: monoclonal antibody, mannopyranoside specificity, molecular mimicry, immune system
Deposited on
2007-07-30, released
2008-08-19
The last revision prior to the SCOPe 2.06 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 2.8 Å
R-factor: 0.2424
AEROSPACI score: 0.17
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: monoclonal antibody
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2v7ha1, d2v7ha2 - Chain 'B':
Compound: monoclonal antibody
Species: Mus musculus [TaxId:10090]
Domains in SCOPe 2.06: d2v7hb2, d2v7hb3 - Chain 'H':
Compound: monoclonal antibody
Species: Mus musculus [TaxId:10090]
Domains in SCOPe 2.06: d2v7hh2, d2v7hh3 - Chain 'L':
Compound: monoclonal antibody
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2v7hl1, d2v7hl2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence; same for both SEQRES and ATOM records: (download)
>2v7hA (A:)
diqmtqttsslsaslgdrvtiscrasqdinnylnwyqqkpdgtvkiliyytsnlhsgvps
rfsgsgsgtdysltisnleqediatyfcqqgntlprtfgggtkleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgsarqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrnec
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2v7hB (B:)
qaqlqqsgaelmkpgasvkisckatgytfsnywidwikqrpghglewigeilpgsgstny
nekfrgkatftadtssntaymqlssltsedsavyyctrrgywaydfdywgqgttltvssa
kttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdl
ytlsssvtvpssprpsetvtcnvahpasstkvdkkivprd
Sequence, based on observed residues (ATOM records): (download)
>2v7hB (B:)
qaqlqqsgaelmkpgasvkisckatgytfsnywidwikqrpghglewigeilpgsgstny
nekfrgkatftadtssntaymqlssltsedsavyyctrrgywaydfdywgqgttltvssa
kttppsvyplapgsasmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdlytls
ssvtvpssprpsetvtcnvahpasstkvdkkivprd
- Chain 'H':
Sequence; same for both SEQRES and ATOM records: (download)
>2v7hH (H:)
qaqlqqsgaelmkpgasvkisckatgytfsnywidwikqrpghglewigeilpgsgstny
nekfrgkatftadtssntaymqlssltsedsavyyctrrgywaydfdywgqgttltvssa
kttppsvyplapgsaaqtnsmvtlgclvkgyfpepvtvtwnsgslssgvhtfpavlqsdl
ytlsssvtvpssprpsetvtcnvahpasstkvdkkivprd
- Chain 'L':
Sequence; same for both SEQRES and ATOM records: (download)
>2v7hL (L:)
diqmtqttsslsaslgdrvtiscrasqdinnylnwyqqkpdgtvkiliyytsnlhsgvps
rfsgsgsgtdysltisnleqediatyfcqqgntlprtfgggtkleikradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgsarqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrnec