PDB entry 2sem
View 2sem on RCSB PDB site
Description: sem5 sh3 domain complexed with peptoid inhibitor
Class: signaling protein/inhibitor
Keywords: SH3 DOMAIN, INHIBITORS, PEPTOIDS, PROTEIN-PROTEIN RECOGNITION, PROLINE-RICH MOTIFS, SIGNAL TRANSDUCTION, SIGNALING PROTEIN, SIGNALING PROTEIN-INHIBITOR complex
Deposited on
1998-11-02, released
1999-01-06
The last revision prior to the SCOPe 2.08 freeze date was dated
2011-07-13, with a file datestamp of
2011-05-08.
Experiment type: XRAY
Resolution: 2.2 Å
R-factor: 0.206
AEROSPACI score: 0.36
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: protein (sex muscle abnormal protein 5)
Species: Caenorhabditis elegans [TaxId:6239]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2sema_ - Chain 'B':
Compound: protein (sex muscle abnormal protein 5)
Species: Caenorhabditis elegans [TaxId:6239]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.08: d2semb_ - Chain 'C':
Compound: protein (sh3 peptoid inhibitor)
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Chain 'D':
Compound: protein (sh3 peptoid inhibitor)
Species: synthetic, synthetic
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2semA (A:)
etkfvqalfdfnpqesgelafkrgdvitlinkddpnwwegqlnnrrgifpsnyvcpynsn
Sequence, based on observed residues (ATOM records): (download)
>2semA (A:)
etkfvqalfdfnpqesgelafkrgdvitlinkddpnwwegqlnnrrgifpsnyvcpyn
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2semB (B:)
etkfvqalfdfnpqesgelafkrgdvitlinkddpnwwegqlnnrrgifpsnyvcpynsn
Sequence, based on observed residues (ATOM records): (download)
>2semB (B:)
tkfvqalfdfnpqesgelafkrgdvitlinkddpnwwegqlnnrrgifpsnyvcpynsn
- Chain 'C':
No sequence available.
- Chain 'D':
No sequence available.