PDB entry 2rj3

View 2rj3 on RCSB PDB site
Description: Crystal Structure of the Uridine Phosphorylase from Salmonella Typhimurium in Complex with Uracil and Phosphate Ion at 2.49A Resolution
Class: transferase
Keywords: uridine phosphorylase, Cytoplasm, Glycosyltransferase, Transferase
Deposited on 2007-10-14, released 2008-10-14
The last revision prior to the SCOPe 2.08 freeze date was dated 2009-02-24, with a file datestamp of 2009-02-03.
Experiment type: XRAY
Resolution: 2.51 Å
R-factor: 0.221
AEROSPACI score: 0.29 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: Uridine phosphorylase
    Species: Salmonella typhimurium [TaxId:602]
    Gene: UDP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2rj3a_
  • Chain 'B':
    Compound: Uridine phosphorylase
    Species: Salmonella typhimurium [TaxId:602]
    Gene: UDP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2rj3b_
  • Chain 'C':
    Compound: Uridine phosphorylase
    Species: Salmonella typhimurium [TaxId:602]
    Gene: UDP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2rj3c_
  • Chain 'D':
    Compound: Uridine phosphorylase
    Species: Salmonella typhimurium [TaxId:602]
    Gene: UDP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2rj3d_
  • Chain 'E':
    Compound: Uridine phosphorylase
    Species: Salmonella typhimurium [TaxId:602]
    Gene: UDP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2rj3e_
  • Chain 'F':
    Compound: Uridine phosphorylase
    Species: Salmonella typhimurium [TaxId:602]
    Gene: UDP
    Database cross-references and differences (RAF-indexed): Domains in SCOPe 2.08: d2rj3f_
  • Heterogens: PO4, URA, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2rj3A (A:)
sksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgka
vivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgasl
hfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfk
gsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesha
vkivveaarrll

    Sequence, based on observed residues (ATOM records): (download) 
    >2rj3A (A:)
sdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkavi
vcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslhf
apmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkgs
meewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqteshavk
ivveaarrll

  • Chain 'B':
    Sequence, based on SEQRES records: (download) 
    >2rj3B (B:)
sksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgka
vivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgasl
hfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfk
gsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesha
vkivveaarrll

    Sequence, based on observed residues (ATOM records): (download) 
    >2rj3B (B:)
sdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkavi
vcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslhf
apmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkgs
meewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqteshavk
ivveaarrll

  • Chain 'C':
    Sequence, based on SEQRES records: (download) 
    >2rj3C (C:)
sksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgka
vivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgasl
hfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfk
gsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesha
vkivveaarrll

    Sequence, based on observed residues (ATOM records): (download) 
    >2rj3C (C:)
sdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkavi
vcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslhf
apmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkgs
meewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmqteshavki
vveaarrll

  • Chain 'D':
    Sequence, based on SEQRES records: (download) 
    >2rj3D (D:)
sksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgka
vivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgasl
hfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfk
gsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesha
vkivveaarrll

    Sequence, based on observed residues (ATOM records): (download) 
    >2rj3D (D:)
sdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkavi
vcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslhf
apmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkgs
meewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnemkqteshavkiv
veaarrll

  • Chain 'E':
    Sequence, based on SEQRES records: (download) 
    >2rj3E (E:)
sksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgka
vivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgasl
hfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfk
gsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesha
vkivveaarrll

    Sequence, based on observed residues (ATOM records): (download) 
    >2rj3E (E:)
sdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkavi
vcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslhf
apmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkgs
meewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnetmkqteshavki
vveaarrll

  • Chain 'F':
    Sequence, based on SEQRES records: (download) 
    >2rj3F (F:)
sksdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgka
vivcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgasl
hfapmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfk
gsmeewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnaetmkqtesha
vkivveaarrll

    Sequence, based on observed residues (ATOM records): (download) 
    >2rj3F (F:)
sdvfhlgltkndlqgaqlaivpgdpervekiaalmdkpvklashreftswraeldgkavi
vcstgiggpstsiaveelaqlgirtflrigttgaiqphinvgdvlvttasvrldgaslhf
apmefpavadfacttalveaaksigatthvgvtassdtfypgqerydtysgrvvrrfkgs
meewqamgvmnyemesatlltmcasqglragmvagvivnrtqqeipnetmkqteshavki
vveaarrll