PDB entry 2rfj
View 2rfj on RCSB PDB site
Description: Crystal structure of the bromo domain 1 in human bromodomain containing protein, testis specific (BRDT)
Class: transcription regulator
Keywords: BRDT, bromodomain containing protein testis specific, Structural Genomics Consortium, SGC, Nucleus, Transcription, Transcription regulation, TRANSCRIPTION REGULATOR
Deposited on
2007-09-30, released
2007-10-23
The last revision prior to the SCOPe 2.05 freeze date was dated
2012-04-11, with a file datestamp of
2012-04-06.
Experiment type: XRAY
Resolution: 2.05 Å
R-factor: 0.194
AEROSPACI score: 0.43
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Bromodomain testis-specific protein
Species: Homo sapiens [TaxId:9606]
Gene: BRDT
Database cross-references and differences (RAF-indexed):
- Uniprot Q58F21
- expression tag (1)
- variant (43)
Domains in SCOPe 2.05: d2rfja1 - Chain 'B':
Compound: Bromodomain testis-specific protein
Species: Homo sapiens [TaxId:9606]
Gene: BRDT
Database cross-references and differences (RAF-indexed):
- Uniprot Q58F21 (2-End)
- expression tag (1)
- variant (43)
Domains in SCOPe 2.05: d2rfjb1 - Chain 'C':
Compound: Bromodomain testis-specific protein
Species: Homo sapiens [TaxId:9606]
Gene: BRDT
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.05: d2rfjc_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2rfjA (A:)
smntkkngrltnqlqylqkvvlkdlwkhsfswpfqrpvdavklqlpdyytiiknpmdlnt
ikkrlenkyyakaseciedfntmfsncylynkpgddivlmaqaleklfmqklsqmpqee
Sequence, based on observed residues (ATOM records): (download)
>2rfjA (A:)
mrltnqlqylqkvvlkdlwkhsfswpfqrpvdklqlpdyytiiknpmdlntikkrlenky
yakaseciedfntmfsncylynkpgddivlmaqaleklfmqklsqmpq
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2rfjB (B:)
smntkkngrltnqlqylqkvvlkdlwkhsfswpfqrpvdavklqlpdyytiiknpmdlnt
ikkrlenkyyakaseciedfntmfsncylynkpgddivlmaqaleklfmqklsqmpqee
Sequence, based on observed residues (ATOM records): (download)
>2rfjB (B:)
mntnqlqylqkvvlkdlwkhsfswpfqrpvklqlpdyytiiknpmdlntikkrlenkyya
kaseciedfntmfsncylynkpgddivlmaqaleklfmqklsqmpq
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2rfjC (C:)
smntkkngrltnqlqylqkvvlkdlwkhsfswpfqrpvdavklqlpdyytiiknpmdlnt
ikkrlenkyyakaseciedfntmfsncylynkpgddivlmaqaleklfmqklsqmpqee
Sequence, based on observed residues (ATOM records): (download)
>2rfjC (C:)
nqlqylqkvvlkdlwkhsfswpfqrpvklqlpdyytiiknpmdlntikkrlenkyyakas
eciedfntmfsncylynkpgddivlmaqaleklfmqklsqm