PDB entry 2rdt

View 2rdt on RCSB PDB site
Description: Crystal Structure of Human Glycolate Oxidase (GO) in Complex with CDST
Class: oxidoreductase
Keywords: Flavoprotein, FMN, Glycolate pathway, Oxidoreductase, Peroxisome
Deposited on 2007-09-25, released 2008-02-26
The last revision prior to the SCOPe 2.08 freeze date was dated 2011-07-13, with a file datestamp of 2011-05-08.
Experiment type: XRAY
Resolution: 1.95 Å
R-factor: 0.18
AEROSPACI score: 0.46 (click here for full SPACI score report)

Chains and heterogens:

  • Chain 'A':
    Compound: hydroxyacid oxidase 1
    Species: Homo sapiens [TaxId:9606]
    Gene: HAO1, GOX1, HAOX1
    Database cross-references and differences (RAF-indexed):
    • Uniprot Q9UJM8 (17-End)
      • expression tag (16)
    Domains in SCOPe 2.08: d2rdta1, d2rdta2
  • Heterogens: FMN, 2RD, HOH

PDB Chain Sequences:

  • Chain 'A':
    Sequence, based on SEQRES records: (download) 
    >2rdtA (A:)
gshmasmtggqqmgrgsmlprlicindyeqhaksvlpksiydyyrsgandeetladniaa
fsrwklyprmlrnvaetdlstsvlgqrvsmpicvgatamqrmahvdgelatvracqslgt
gmmlsswatssieevaeagpealrwlqlyiykdrevtkklvrqaekmgykaifvtvdtpy
lgnrlddvrnrfklppqlrmknfetstlsfspeenfgddsglaayvakaidpsiswedik
wlrrltslpivakgilrgddareavkhglngilvsnhgarqldgvpatidvlpeiveave
gkvevfldggvrkgtdvlkalalgakavfvgrpivwglafqgekgvqdvleilkeefrla
malsgcqnvkvidktlvrknplavski

    Sequence, based on observed residues (ATOM records): (download) 
    >2rdtA (A:)
smlprlicindyeqhaksvlpksiydyyrsgandeetladniaafsrwklyprmlrnvae
tdlstsvlgqrvsmpicvgatamqrmahvdgelatvracqslgtgmmlsswatssieeva
eagpealrwlqlyiykdrevtkklvrqaekmgykaifvtvdtpylgnrlddvrnrflaay
vakaidpsiswedikwlrrltslpivakgilrgddareavkhglngilvsnhgarqldgv
patidvlpeiveavegkvevfldggvrkgtdvlkalalgakavfvgrpivwglafqgekg
vqdvleilkeefrlamalsgcqnvkvidktlvrkn