PDB entry 2qho
View 2qho on RCSB PDB site
Description: Crystal structure of the UBA domain from EDD ubiquitin ligase in complex with ubiquitin
Class: protein binding/ligase
Keywords: protein-protein complex, protein binding/ligase COMPLEX
Deposited on
2007-07-02, released
2007-09-25
The last revision prior to the SCOPe 2.03 freeze date was dated
2009-02-24, with a file datestamp of
2009-02-03.
Experiment type: XRAY
Resolution: 1.85 Å
R-factor: 0.209
AEROSPACI score: 0.46
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: Ubiquitin
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2qhoa_ - Chain 'B':
Compound: E3 ubiquitin-protein ligase EDD1
Species: Homo sapiens [TaxId:9606]
Gene: EDD1, EDD, HYD, KIAA0896
Database cross-references and differences (RAF-indexed):
- Chain 'C':
Compound: Ubiquitin
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2qhoc_ - Chain 'D':
Compound: E3 ubiquitin-protein ligase EDD1
Species: Homo sapiens [TaxId:9606]
Gene: EDD1, EDD, HYD, KIAA0896
Database cross-references and differences (RAF-indexed):
- Chain 'E':
Compound: Ubiquitin
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2qhoe_ - Chain 'F':
Compound: E3 ubiquitin-protein ligase EDD1
Species: Homo sapiens [TaxId:9606]
Gene: EDD1, EDD, HYD, KIAA0896
Database cross-references and differences (RAF-indexed):
- Chain 'G':
Compound: Ubiquitin
Species: Bos taurus [TaxId:9913]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.03: d2qhog_ - Chain 'H':
Compound: E3 ubiquitin-protein ligase EDD1
Species: Homo sapiens [TaxId:9606]
Gene: EDD1, EDD, HYD, KIAA0896
Database cross-references and differences (RAF-indexed):
- Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2qhoA (A:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>2qhoA (A:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlr
- Chain 'B':
No sequence available.
- Chain 'C':
Sequence; same for both SEQRES and ATOM records: (download)
>2qhoC (C:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
- Chain 'D':
No sequence available.
- Chain 'E':
Sequence, based on SEQRES records: (download)
>2qhoE (E:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>2qhoE (E:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrg
- Chain 'F':
No sequence available.
- Chain 'G':
Sequence, based on SEQRES records: (download)
>2qhoG (G:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlrlrgg
Sequence, based on observed residues (ATOM records): (download)
>2qhoG (G:)
mqifvktltgktitlevepsdtienvkakiqdkegippdqqrlifagkqledgrtlsdyn
iqkestlhlvlr
- Chain 'H':
No sequence available.