PDB entry 2q8b
View 2q8b on RCSB PDB site
Description: Structure of the malaria antigen AMA1 in complex with a growth-inhibitory antibody
Class: Immune System
Keywords: antigen-antibody complex, Immune System
Deposited on
2007-06-10, released
2007-10-09
The last revision prior to the SCOPe 2.06 freeze date was dated
2014-09-10, with a file datestamp of
2014-09-05.
Experiment type: XRAY
Resolution: 2.3 Å
R-factor: 0.212
AEROSPACI score: 0.28
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: apical membrane antigen 1
Species: PLASMODIUM FALCIPARUM [TaxId:36329]
Gene: AMA1
Database cross-references and differences (RAF-indexed):
- Chain 'H':
Compound: 1F9 heavy chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2q8bh1 - Chain 'L':
Compound: 1F9 light chain
Species: Mus musculus [TaxId:10090]
Database cross-references and differences (RAF-indexed):
Domains in SCOPe 2.06: d2q8bl1, d2q8bl2 - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
No sequence available.
- Chain 'H':
Sequence, based on SEQRES records: (download)
>2q8bH (H:)
evqlqqsgaellrpgasvklscivsgfkikdtsmhwvkqrpeqglewigridpandnsey
dpkfqgkatitadtssntaylqlssltsedtavyyctlshfwgqgttltvssakttppsv
yplapgcgdttgssvtlgclvkgyfpesvtvtwnsgslsssvhtfpallqsglytmsssv
tvpsstwpsqtvtcsvahpassttvdkkle
Sequence, based on observed residues (ATOM records): (download)
>2q8bH (H:)
evqlqqsgaellrpgasvklscivsgfkikdtsmhwvkqrpeqglewigridpandnsey
dpkfqgkatitadtssntaylqlssltsedtavyyctlshfwgqgttltvssakttppsv
yplapgcssvtlgclvkgyfpesvtvtwnsvhtfpallqsglytmsssvtvpsstwpsqt
vtcsvahpassttvdkkle
- Chain 'L':
Sequence, based on SEQRES records: (download)
>2q8bL (L:)
sivmtqtpkflpvsagdrvtiickasqsvsndvvwyqqkpgqspklliyyasirytgvpd
rftgsgygtdftftistvqvedlavyfcqqgfssprtfgggtkleinradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrnec
Sequence, based on observed residues (ATOM records): (download)
>2q8bL (L:)
sivmtqtpkflpvsagdrvtiickasqsvsndvvwyqqkpgqspklliyyasirytgvpd
rftgsgygtdftftistvqvedlavyfcqqgfssprtfgggtkleinradaaptvsifpp
sseqltsggasvvcflnnfypkdinvkwkidgserqngvlnswtdqdskdstysmsstlt
ltkdeyerhnsytceathktstspivksfnrne