PDB entry 2q87
View 2q87 on RCSB PDB site
Description: The Crystal Structure of the Human IRp60 Ectodomain
Class: immune system
Keywords: All-beta, immunoglobulin, IG-SUPERFAMILY, IG-V, NKP44-LIKE, Natural killer Cell IG-LIKE RECEPTOR, inhibitory receptor, myelo-monocytic cells, negative regulation of leukocyte, negative regulation of natural killer cells, negative regulation of natural mast cells, membrane protein, irp60, cmrf35, irem, ncr, IMMUNE SYSTEM
Deposited on
2007-06-09, released
2007-07-03
The last revision prior to the SCOPe 2.05 freeze date was dated
2012-07-25, with a file datestamp of
2012-07-20.
Experiment type: XRAY
Resolution: 1.7 Å
R-factor: 0.218
AEROSPACI score: 0.49
(click here for full SPACI score report)
Chains and heterogens:
- Chain 'A':
Compound: CMRF35-H antigen
Species: Homo sapiens [TaxId:9606]
Gene: CD300A, CMRF35H
Database cross-references and differences (RAF-indexed):
- Uniprot Q9UGN4 (0-106)
- engineered (2)
- conflict (92)
Domains in SCOPe 2.05: d2q87a_ - Chain 'B':
Compound: CMRF35-H antigen
Species: Homo sapiens [TaxId:9606]
Gene: CD300A, CMRF35H
Database cross-references and differences (RAF-indexed):
- Uniprot Q9UGN4 (Start-106)
- conflict (92)
- cloning artifact (107-109)
Domains in SCOPe 2.05: d2q87b_ - Chain 'C':
Compound: CMRF35-H antigen
Species: Homo sapiens [TaxId:9606]
Gene: CD300A, CMRF35H
Database cross-references and differences (RAF-indexed):
- Uniprot Q9UGN4 (Start-106)
- conflict (92)
- cloning artifact (107-108)
Domains in SCOPe 2.05: d2q87c_ - Heterogens: HOH
PDB Chain Sequences:
- Chain 'A':
Sequence, based on SEQRES records: (download)
>2q87A (A:)
skartvagpvggslsvqcpyekehrtlnkywcrppqiflcdkivetkgsagkrngrvsir
dspanlsftvtlenlteedagtywcgvdtpwlqdfhdpvvevevsvfpas
Sequence, based on observed residues (ATOM records): (download)
>2q87A (A:)
skartvagpvggslsvqcpyekehrtlnkywcrppqiflcdkivetkgsagkrngrvsir
dspanlsftvtlenlteedagtywcgvdtpwlqdfhdpvvevevsvf
- Chain 'B':
Sequence, based on SEQRES records: (download)
>2q87B (B:)
skartvagpvggslsvqcpyekehrtlnkywcrppqiflcdkivetkgsagkrngrvsir
dspanlsftvtlenlteedagtywcgvdtpwlqdfhdpvvevevsvfpas
Sequence, based on observed residues (ATOM records): (download)
>2q87B (B:)
rtvagpvggslsvqcpyekehrtlnkywcrppqiflcdkivetkgsagkrngrvsirdsp
anlsftvtlenlteedagtywcgvdtpwlqdfhdpvvevevsvfpas
- Chain 'C':
Sequence, based on SEQRES records: (download)
>2q87C (C:)
skartvagpvggslsvqcpyekehrtlnkywcrppqiflcdkivetkgsagkrngrvsir
dspanlsftvtlenlteedagtywcgvdtpwlqdfhdpvvevevsvfpas
Sequence, based on observed residues (ATOM records): (download)
>2q87C (C:)
rtvagpvggslsvqcpyekehrtlnkywcrppqiflcdkivetkgsagkrngrvsirdsp
anlsftvtlenlteedagtywcgvdtpwlqdfhdpvvevevsvfpa